| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1004 |
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| Symbol | |
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| ID | 5196966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1118097 |
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| End bp | 1119233 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580550 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001261509 |
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| Protein GI | 148553927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0116048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC AGGACGCCAT AGCGACCATC GACGAGATCG TCGAAGAGGC GCGCAACGGC
CGCATGTTCA TCCTGGTCGA CGACGAGGAC CGGGAGAATG AGGGCGACCT CGTCATCCCC
GCGCAGATGG CGACGCCCGA CGCGGTCAAC TTCATGGCGC GCGAGGGGCG GGGGCTGATC
TGCCTGTCGA TGACGCGGGC GCGGGTGGCG GAACTGGGCC TGGACCCGAT GAGCCGCGAT
AACCGATCGC CCTACGAGAC CGCCTTCACC GTCTCGATCG AGGCGCGCGA GGGGGTGACC
ACCGGCATCT CCGCCGCCGA CCGCGCCCGG ACGATCGCGA CCGCGATCGA CGCCGCCAAC
GGCCCCGACG CGATCGTCAC GCCGGGCCAT GTCTTCCCGC TGATCGCGCG CGACGGCGGG
GTGCTGGTGC GCGCGGGGCA TACCGAGGCG GCCGTCGACA TCGCCCGGCT GGCGGGGCTC
AACCCGTCCG GCGTGATCTG CGAGATCATG AAGGACGACG GCACCATGGC GCGGATGGAC
GACCTGATCG GCTTCGCGCG CCGCCATGGG CTGAAGATCG GCACGATCCG CGACCTGATC
GCCTATCGCC TGCGCCGCGA CCATAATCTG GAGCGGGTGG GGGAGGCGCC CTTCCACAGC
ATCTTCGGCG GCGACTGGAC CGCCGTCACC TTCCGCAACA AGGCCTATGA CAGCGAGATG
CTGGCGCTGG TCAAGGGCCG GGTCGACCCG GCCAGGCCGA CGCTGGTGCG GATGCACGTC
GTCGACGTGT TCACCGACAT GCTGGGGGTG GAGGGCGAGC GCCACGGCCT GCTCCAGAGC
GCGATGGCCG AGATCGCCCG CGAAGGGGCC GGCGTGATCG TGATGATCAC CCAACAGATG
CCGAACATGC TGACCCGCTT CGTCCGCCGC AAGGCCGACG AGAGCCCGGC CAAGAGCGAC
CTGGAGGAGC TGCGCGACTA TGGCGTGGGG GCGCAGATAT TGTCGGCGCT CGGCGTCCAC
GACATGATCC TGCTGACCAA TTCGCCGCGC ACGCTGGTGG CGTTGCGGGG CTTCGCGCTC
GACGTCGTCG GGCATCGCCC GATGCGCAGC ACCGCGCCGC GGAGCTGGAT CCGGTGA
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| Protein sequence | MAAQDAIATI DEIVEEARNG RMFILVDDED RENEGDLVIP AQMATPDAVN FMAREGRGLI
CLSMTRARVA ELGLDPMSRD NRSPYETAFT VSIEAREGVT TGISAADRAR TIATAIDAAN
GPDAIVTPGH VFPLIARDGG VLVRAGHTEA AVDIARLAGL NPSGVICEIM KDDGTMARMD
DLIGFARRHG LKIGTIRDLI AYRLRRDHNL ERVGEAPFHS IFGGDWTAVT FRNKAYDSEM
LALVKGRVDP ARPTLVRMHV VDVFTDMLGV EGERHGLLQS AMAEIAREGA GVIVMITQQM
PNMLTRFVRR KADESPAKSD LEELRDYGVG AQILSALGVH DMILLTNSPR TLVALRGFAL
DVVGHRPMRS TAPRSWIR
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