| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0938 |
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| Symbol | |
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| ID | 5197967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1047135 |
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| End bp | 1048970 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580484 |
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| Product | X-Pro dipeptidyl-peptidase domain-containing protein |
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| Protein accession | YP_001261443 |
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| Protein GI | 148553861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.274521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGTC GATCCTGGGC TGCGGCCCTC GCACTGGTCG CCCTGCTGTC GGGCACCGCC
CCGGCGGCGG CTCCGCAGGC GCCGGTCGAC CTGCTCGACC TGATGAAGGT TCGCGGCGCC
GCGACCGTGC AGCGCGGTGT TCCGGTCACG CTGCGCGACG GCACGCGGCT GTTCGCCACC
CTCGTCACGC CGAACCGGCC CGCCGGCGAG CGGCTGCCGA CGATCCTGAT CCAGTCGCCC
TATGATCCGT CCTGGGAGCT GGGCGGCGCG ACCGTCTCCC GCCTCGTCCA TGCCGGCTAT
GCGATCGTCG TCGTCAACGC GCGCGGCACC CAATGGTCGG AGGGTGAATA TCACTGGATG
AAGGGCGCCG CCGACGACGG CGAGGACAGC GTCAAATGGG TGACGGCGCA GCCCTGGTCG
AACGGCAAGG TCGGCGCCTA TGGCTGCTCG TCGAGCGGCG AGGTGCAGTT CGCCCTCGCC
AAGCGCAATC CGCCCGGCCT GAAGGCGATG GTGGCGATGG CGGCGGCCAC CGGGGTCGGC
GTGATCCCCG GCTATGCCGA CCAGGGCATC TTCTACACCG GCGGGGTGCC GTCGTTCGAC
TGGGCCTATT GGTATCGCAC CCAGGGCCAT CTCCATCACC CCAAGCTGCC GGCCGGCATC
TCGCAGCAGG AGCGCGAGGC GCTGATCGCC ACCTATTCGG CGGCGGCCAG CGCGCCGGAA
GGATGGGACT GGGCGAAGCA TCTGCCGAGC CGCGACGTAT TGAAGGCGAC GGGATCGCCC
GAGTCCGAGT TCGACCGGAT GATCGCGATG AAGCCGAACG ATCCGCGCTG GCGCGAATAT
GACTTCCTCA ACACCGGCGA CAGCACGCGG GTGCCGATGC TGCACGTCGA CAGCTGGTAC
GACACGATCG AGGTCTATCC CACCGCCAAG GCCTTCGAAT ATCTCTCGCG CAATTCGCCG
GACCAATATC TGATCCTCGG CGGCACCGCG CATTGCTCGA TGGGGACCGA GACCGAGAAG
ACGATGGTCG GCGAGCGGCC GATCGGCGAC GCCCGCTTCG ACTATGAAGG GCAGGTCGTG
CGCTGGTTCG ACCATTGGCT GAAGGACGAC GGCAAGGGCG AGCTGGCGAT GCCGCGCGTC
CAATATTACC CGCTCGAAGC GAACCGCTGG GTGAGCGACA AGGCGTGGCC GCCGCGCTCG
ACGCCGCGCC GCCTGTTCCT CGACAGCGCG GGCGACGCGA ACGGGCTGGC CGGCGGCGGC
AAGCTGGTCG ACCGGCCGGG CAGGGGCGCG CCCGACCGCT TCGCCAGCGA TCCGCTGAAC
CCCGTGCCGA CCCATGGCGG CGGCTGCTGC GACCGCAACG TCTCGCGCGA CCAGAGCGCG
ATCGAGCGGC GCGACGACGT GCTCGTCTAC ACGACCGCGC CGTTCGACAG GACATTGAAG
GTCGCGGGCT ATGTCAACGC CACGCTCTAT CTGTCGACCT CGACGCCCGA CGCCGACGTG
GCGGTGAAGC TGGTCGACGT CTATCCCGAC GGCAAGGCGT ACAACATCTA CGACACGATC
CAGCGGCTGC GCTATCGCGA CGGGATCGAC CGCGAGGCGC CGATGGAGCC CGGCCGCGTC
TACAAGGTCG AGCTGAAGCA GATCGTCGCC GCTTCGCATT TCGCGCCCGG CCACCGCCTG
CGCATCGAGA TCGCCGGCAG CAACTTCCCG CAATATGAGC GGAACATGCA CCGGGGCGGC
GCGAACCATG AGCAGCGCGA GCCGGTGACC GCCAGCACTA CCCTCTATCA CGACAAGGAT
CGCGCCTCGT TCATTGAACT GCCGGTGGTG CCCTGA
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| Protein sequence | MRRRSWAAAL ALVALLSGTA PAAAPQAPVD LLDLMKVRGA ATVQRGVPVT LRDGTRLFAT
LVTPNRPAGE RLPTILIQSP YDPSWELGGA TVSRLVHAGY AIVVVNARGT QWSEGEYHWM
KGAADDGEDS VKWVTAQPWS NGKVGAYGCS SSGEVQFALA KRNPPGLKAM VAMAAATGVG
VIPGYADQGI FYTGGVPSFD WAYWYRTQGH LHHPKLPAGI SQQEREALIA TYSAAASAPE
GWDWAKHLPS RDVLKATGSP ESEFDRMIAM KPNDPRWREY DFLNTGDSTR VPMLHVDSWY
DTIEVYPTAK AFEYLSRNSP DQYLILGGTA HCSMGTETEK TMVGERPIGD ARFDYEGQVV
RWFDHWLKDD GKGELAMPRV QYYPLEANRW VSDKAWPPRS TPRRLFLDSA GDANGLAGGG
KLVDRPGRGA PDRFASDPLN PVPTHGGGCC DRNVSRDQSA IERRDDVLVY TTAPFDRTLK
VAGYVNATLY LSTSTPDADV AVKLVDVYPD GKAYNIYDTI QRLRYRDGID REAPMEPGRV
YKVELKQIVA ASHFAPGHRL RIEIAGSNFP QYERNMHRGG ANHEQREPVT ASTTLYHDKD
RASFIELPVV P
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