Gene Swit_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0913 
Symbol 
ID5200608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1005733 
End bp1007049 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content68% 
IMG OID640580459 
Productamidohydrolase 
Protein accessionYP_001261418 
Protein GI148553836 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.887966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.946432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTT TCCTTTCCTC CCGCCTGCTG CGCGTCGCGG CGCTGGCCCT GTGCGCGACG 
TCGACGGCGG CGCTCGCGCG CGACGTCGTG GTCCATGCCG GCCATCTGAT CGACGGCGTC
TCCGCCAAGC CGCGGGACAA GGTCTCCATC CTGATCCACG ACGACCGGAT CACGGCCGTG
CAGGACGGCT TCGTGACGCC GGCCGGCGCC GAGGTGGTCG ATCTCTCCTC GGCGACGGTG
CTGCCGGGGC TGATCGACAT GCACGATCAC ATCACCGGCC AATATACCGG CAAGAATCCC
ATCGCCGAGC GCTTCACCAC CAACAATCTC GACACCGCCT ATGAGTCGGT CGCCTATGTG
AAGCGCACCC TCGATGCCGG CTTCACCTCG GTGCGCGACG TCGGCGGCGA CACCGACGTC
GTCGTCGCGC TGAAGCGCGC GATCAAGAGC GGCGAGATTT CCGGCCCGCG CCTGTGGGTT
TCGGGCTATC CGCTCGGCCC CAGCGGCGGT CATGGCGATC CGCGCAACGG CATCCGCACC
GACCTCGACC TGCACAGCGA GAACAAGGTC GTCGACGGCC CCGAGGCGGC GGTGCGCATC
GTCCGCGAGA TGCACCGCGA CGGCGTCGAC CTGATCAAGA TCATGCCCAG CGGCGGGGTC
CTCAGCATCG GCGACGATCC CAACGTCACC CTGATGAGCG ACGCCGAGAT CAAGGCGATC
GTCGATACTG CCCATAATCT GGGCATGCGC GTCGCCGCCC ACGCCCACGG CCAGAACGCC
ATCGTCCGCG CCTCCGCGCT GGGCGTCGAT TCGATCGAGC ATGGCTCGTT CGGCGATGCC
GAGGCGTACA AGGTGATGAA GGAGCACGGC ACCTGGCTGG TGCCGACGCT GCTGGTGGCG
GACACGGTGG TGAAGGTCGC CAAGGCGCAC CCGGAATCGC TGCCGCCTTC GTCGGCGAAG
AAGGCGCTGG AGGTCGGTCC GATCACGCTC CGCAATCTCG GCGCGGCCTA CAAGGCCGGC
GTCAAGATCG CCTTCGGGAC CGATCAGGGC ATGGCCCCGC ACGGCACCAA CGGCAAGGAG
TTCGCGCTGA TGGTCGCGGC CGGCATGCCG CCGATGGAGA CGATCCGTGC CGCGACGGTG
AACGCCGCCG AACTGCTGGG CGCCAAGGCC GATGTCGGCT CGGTGCAGGC CGGGCGCTAT
GCCGACATCA TCGCGGTATC GGGCGATCCG CTGTCCGACG TCACCGAACT GGAGCGCGTG
CGCTTCGTGA TGAAGGGCGG CGACGTGGTG AAGCCCTGGA GCGCGGCCGC GCAATAA
 
Protein sequence
MAGFLSSRLL RVAALALCAT STAALARDVV VHAGHLIDGV SAKPRDKVSI LIHDDRITAV 
QDGFVTPAGA EVVDLSSATV LPGLIDMHDH ITGQYTGKNP IAERFTTNNL DTAYESVAYV
KRTLDAGFTS VRDVGGDTDV VVALKRAIKS GEISGPRLWV SGYPLGPSGG HGDPRNGIRT
DLDLHSENKV VDGPEAAVRI VREMHRDGVD LIKIMPSGGV LSIGDDPNVT LMSDAEIKAI
VDTAHNLGMR VAAHAHGQNA IVRASALGVD SIEHGSFGDA EAYKVMKEHG TWLVPTLLVA
DTVVKVAKAH PESLPPSSAK KALEVGPITL RNLGAAYKAG VKIAFGTDQG MAPHGTNGKE
FALMVAAGMP PMETIRAATV NAAELLGAKA DVGSVQAGRY ADIIAVSGDP LSDVTELERV
RFVMKGGDVV KPWSAAAQ