Gene Swit_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0843 
Symbol 
ID5197517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp939914 
End bp941455 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content71% 
IMG OID640580387 
Productacyl-CoA synthetase 
Protein accessionYP_001261348 
Protein GI148553766 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.333452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.193709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCG CCGCCCCTCC GCAAAGCCAG TCCCTGTCGC TGATGCTGCG GCGGTCCGCC 
TCGCGCCATG GCGACAAGAC GGCGCTGGTC TTCGAAGACG AGGCCTGGAG CTATGCGGAG
CTCGATCGGC TGGCCGACGA ACTGGGCGAA GGCCTGCTGC GGCTCGGCAT CGAGGCCGGC
GACCGGGTCG CGATCCTCGC GCGCAACAGC CATGCCTTCC TCGCGCTGCG CTTCGCCGTC
GCGCGGATCG CGGCGGTGCT GGTCCCGGTC AACGCGATGC TCGGCCCGGC CGAGGTCGCC
TATGTCCTCG ACCATTCGGG CGCGCGGCTG CTGTTCGCCG ACGCCGCGCT GCTCCCGCTC
GCCCGCGAGG CCGCGCCCGC CACGGTCGAG GAGATGCTGA TCCTCACCGG CCGGGACGAC
GACGACGGAT GCCGCGGCTG GCGCGCGCTG CTCGTCCCCG GCGCGGCCCC CGGCGACCGC
GCCGACGGCG CAGACCTGCT CCAGATCATC TACACCAGCG GCACCGAGAG CCGGCCCAAG
GGCGCGATGC TCAGCCATTC CGCCGTGCTG TGGCAATATC AGAGTTGCCT GTTCGATTGC
GACTGGTCGC CCGACGTCAT CGCCCTCCAC GCGCTGCCGC TGTTCCACTG CGCCGCGCTC
GACGCGATGG CCGGCCCCGC GCTGATGGCC GGCGCGACCA GCGTCGTCGC GGCATCGCCC
GCGCCCGAGC TGGTCATTCC GCTGATCGAG CGCCACCGCA TATCCTCCTT CTTCGCCCCG
CCGACCGTGT GGATCGCGCT GCTGCGATCG CCGCTGTTCG AGAAGCACGA CCTTTCGTCG
CTGACGCGCG GCTTCTACGG CGCCGCGATC ATGCCGGCGG CGGTGATCGA GGAGATGGAG
GCCCGCCTGC CGGGCCTGAG GCTCTGGAAC CTCTACGGCC AGACCGAGAT CGCCCCGGTC
GCGACGGTGC TCCGCCCCGA GGAGCATGCG GCCAGGCCGA CCTCGGCCGG CCGCGCGACG
CTCCACGTCC AGACCCGCGT GGTCGACGAG GAGATGCGCG ACGTCGCCCC CGGCGAGATC
GGCGAGATCG TCCACCGCTC GCCCCAATTG CTGTCGGGCT ATTGGCGGCA GCCGGAGCTC
GGCGAAGCCG CCTTCGCGGG CGGCTGGTTC CACAGCGGCG ACCTCGCGAC GATCGACGCG
GAAGGCTTCA TCACCGTCGT CGACCGCAAG AAGGACATGA TCAAGAGCGG CGGCGAGAAC
GTCTCCTCGC GCGAGGTCGA GGAGGCGATC TACGCCCACC CGCAGGTGTC GGAGGTCGCG
GTGATCGGGC TGCCCGATCC CCGCTGGATC GAGGCGGTGA CCGCCTTCAT CGTCCCGCGC
GCCGGCTCCA GCCTGTCGGT GGAGGACATC CAGGCCCATT GCGCCGGCCG CCTCGCCGGC
TTCAAGCGGC CCAAGCGGAT CTGCTTCGTC CCCGAACTGC CGCGCAACGC CGCCGGCAAG
ATCCTCAAGC GGGAATTGCG CGAGCAGGCG ATCACCGCCT GA
 
Protein sequence
MYPAAPPQSQ SLSLMLRRSA SRHGDKTALV FEDEAWSYAE LDRLADELGE GLLRLGIEAG 
DRVAILARNS HAFLALRFAV ARIAAVLVPV NAMLGPAEVA YVLDHSGARL LFADAALLPL
AREAAPATVE EMLILTGRDD DDGCRGWRAL LVPGAAPGDR ADGADLLQII YTSGTESRPK
GAMLSHSAVL WQYQSCLFDC DWSPDVIALH ALPLFHCAAL DAMAGPALMA GATSVVAASP
APELVIPLIE RHRISSFFAP PTVWIALLRS PLFEKHDLSS LTRGFYGAAI MPAAVIEEME
ARLPGLRLWN LYGQTEIAPV ATVLRPEEHA ARPTSAGRAT LHVQTRVVDE EMRDVAPGEI
GEIVHRSPQL LSGYWRQPEL GEAAFAGGWF HSGDLATIDA EGFITVVDRK KDMIKSGGEN
VSSREVEEAI YAHPQVSEVA VIGLPDPRWI EAVTAFIVPR AGSSLSVEDI QAHCAGRLAG
FKRPKRICFV PELPRNAAGK ILKRELREQA ITA