Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0843 |
Symbol | |
ID | 5197517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 939914 |
End bp | 941455 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640580387 |
Product | acyl-CoA synthetase |
Protein accession | YP_001261348 |
Protein GI | 148553766 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.333452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.193709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCCCG CCGCCCCTCC GCAAAGCCAG TCCCTGTCGC TGATGCTGCG GCGGTCCGCC TCGCGCCATG GCGACAAGAC GGCGCTGGTC TTCGAAGACG AGGCCTGGAG CTATGCGGAG CTCGATCGGC TGGCCGACGA ACTGGGCGAA GGCCTGCTGC GGCTCGGCAT CGAGGCCGGC GACCGGGTCG CGATCCTCGC GCGCAACAGC CATGCCTTCC TCGCGCTGCG CTTCGCCGTC GCGCGGATCG CGGCGGTGCT GGTCCCGGTC AACGCGATGC TCGGCCCGGC CGAGGTCGCC TATGTCCTCG ACCATTCGGG CGCGCGGCTG CTGTTCGCCG ACGCCGCGCT GCTCCCGCTC GCCCGCGAGG CCGCGCCCGC CACGGTCGAG GAGATGCTGA TCCTCACCGG CCGGGACGAC GACGACGGAT GCCGCGGCTG GCGCGCGCTG CTCGTCCCCG GCGCGGCCCC CGGCGACCGC GCCGACGGCG CAGACCTGCT CCAGATCATC TACACCAGCG GCACCGAGAG CCGGCCCAAG GGCGCGATGC TCAGCCATTC CGCCGTGCTG TGGCAATATC AGAGTTGCCT GTTCGATTGC GACTGGTCGC CCGACGTCAT CGCCCTCCAC GCGCTGCCGC TGTTCCACTG CGCCGCGCTC GACGCGATGG CCGGCCCCGC GCTGATGGCC GGCGCGACCA GCGTCGTCGC GGCATCGCCC GCGCCCGAGC TGGTCATTCC GCTGATCGAG CGCCACCGCA TATCCTCCTT CTTCGCCCCG CCGACCGTGT GGATCGCGCT GCTGCGATCG CCGCTGTTCG AGAAGCACGA CCTTTCGTCG CTGACGCGCG GCTTCTACGG CGCCGCGATC ATGCCGGCGG CGGTGATCGA GGAGATGGAG GCCCGCCTGC CGGGCCTGAG GCTCTGGAAC CTCTACGGCC AGACCGAGAT CGCCCCGGTC GCGACGGTGC TCCGCCCCGA GGAGCATGCG GCCAGGCCGA CCTCGGCCGG CCGCGCGACG CTCCACGTCC AGACCCGCGT GGTCGACGAG GAGATGCGCG ACGTCGCCCC CGGCGAGATC GGCGAGATCG TCCACCGCTC GCCCCAATTG CTGTCGGGCT ATTGGCGGCA GCCGGAGCTC GGCGAAGCCG CCTTCGCGGG CGGCTGGTTC CACAGCGGCG ACCTCGCGAC GATCGACGCG GAAGGCTTCA TCACCGTCGT CGACCGCAAG AAGGACATGA TCAAGAGCGG CGGCGAGAAC GTCTCCTCGC GCGAGGTCGA GGAGGCGATC TACGCCCACC CGCAGGTGTC GGAGGTCGCG GTGATCGGGC TGCCCGATCC CCGCTGGATC GAGGCGGTGA CCGCCTTCAT CGTCCCGCGC GCCGGCTCCA GCCTGTCGGT GGAGGACATC CAGGCCCATT GCGCCGGCCG CCTCGCCGGC TTCAAGCGGC CCAAGCGGAT CTGCTTCGTC CCCGAACTGC CGCGCAACGC CGCCGGCAAG ATCCTCAAGC GGGAATTGCG CGAGCAGGCG ATCACCGCCT GA
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Protein sequence | MYPAAPPQSQ SLSLMLRRSA SRHGDKTALV FEDEAWSYAE LDRLADELGE GLLRLGIEAG DRVAILARNS HAFLALRFAV ARIAAVLVPV NAMLGPAEVA YVLDHSGARL LFADAALLPL AREAAPATVE EMLILTGRDD DDGCRGWRAL LVPGAAPGDR ADGADLLQII YTSGTESRPK GAMLSHSAVL WQYQSCLFDC DWSPDVIALH ALPLFHCAAL DAMAGPALMA GATSVVAASP APELVIPLIE RHRISSFFAP PTVWIALLRS PLFEKHDLSS LTRGFYGAAI MPAAVIEEME ARLPGLRLWN LYGQTEIAPV ATVLRPEEHA ARPTSAGRAT LHVQTRVVDE EMRDVAPGEI GEIVHRSPQL LSGYWRQPEL GEAAFAGGWF HSGDLATIDA EGFITVVDRK KDMIKSGGEN VSSREVEEAI YAHPQVSEVA VIGLPDPRWI EAVTAFIVPR AGSSLSVEDI QAHCAGRLAG FKRPKRICFV PELPRNAAGK ILKRELREQA ITA
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