Gene Swit_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0736 
Symbol 
ID5199012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp817431 
End bp818513 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID640580280 
ProductNAD/NADP octopine/nopaline dehydrogenase 
Protein accessionYP_001261241 
Protein GI148553659 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.879185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.158258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCG CGGTATTGGG CGGGGGACAT GGCTGCTACG CGGCGGCGGT TGAACTGAGC 
GAGAAGGGCC ATGAGGTCTG GTTCTGGCGC CGCGGCGCCG AGGCGTTCGC GCCGGTGCTG
GAGAAGCGCG GCATCCGCAT CCGCGACTCC AGGGGCGACC GCGAGGTCGC GATCGCGCAC
CCGACGCTGT CGCTGGAGGA GGCGATCACC TCGGCCGAGG TCGTCGTGAT CCCGCTGCCG
GCCGACACCC ATGCGGACCT GGCCGTCGCC TGCGCGCCTT ATTGGCGTGA CGGGCAGGTC
GCCTTCCTGC CGCCGGGCAC CCTCGGCTCG ATCCTGTTCG CGCAGGCGGC GCGCGCGGCC
GGCAACAGCG CCGACGTCAG CTTCGCCGAG ACCGGCACCT TGCCCTATCT GGTGCGCAAG
CACGGTCCGG CCGAGATCGT CGTCAGCGCC TATGCCACCC GCCTGCCGAC CGGCGTGTTC
CCGGCGCGCA ACGCCGACCA TGCCTTCGGG CTGCTCGAAC AGGTCTATCC GGCGATCGAG
CGGATCGAGG ACGGGCTGTC GGGCGGGCTG ATGAACGCCG GGCCGATCAT CCACCCGCCG
CTGATCCTGA TGAATGCCGG GCCGCTCGAA TATTTCCCGG CCTGGGACAT CCACAACGAA
GGCACCCAGC CGTCGATCCG CGCCGTCACC ACCGCGCTCG ACAATGAGCG GATCGTGCTG
CGCGAGGCGC TCGGCTATCG CGCGCCGCAC TTCCCGCTCG CCGATCACTA CACCCTCGAC
GGCGACGAAT GGATGTACGG CAACGCCGCG CACGAGAAGC TGACCGACAG CGGCGACTGG
CGCGAGAAGA TCGATCTCAA GACGCATCGC TACATGCGCG AGGATACCGC GCTCGGCCTG
TCGATGCTGG TGTCGATCGG CCGCTGGCTG GGCGTCGAGA CCCCGGTCGC CTCCGGCCTG
CTCGCCATGG CGTCGGCGAT CACCGGCGAG GACCTCTATG CCGCCGGCCG CACGCTCGAA
AGCCTCGGGC TCGACACGCT CGACCGCAAC GCGATGAAGG ATTTCCTGCA TGACGGCATC
TGA
 
Protein sequence
MRVAVLGGGH GCYAAAVELS EKGHEVWFWR RGAEAFAPVL EKRGIRIRDS RGDREVAIAH 
PTLSLEEAIT SAEVVVIPLP ADTHADLAVA CAPYWRDGQV AFLPPGTLGS ILFAQAARAA
GNSADVSFAE TGTLPYLVRK HGPAEIVVSA YATRLPTGVF PARNADHAFG LLEQVYPAIE
RIEDGLSGGL MNAGPIIHPP LILMNAGPLE YFPAWDIHNE GTQPSIRAVT TALDNERIVL
REALGYRAPH FPLADHYTLD GDEWMYGNAA HEKLTDSGDW REKIDLKTHR YMREDTALGL
SMLVSIGRWL GVETPVASGL LAMASAITGE DLYAAGRTLE SLGLDTLDRN AMKDFLHDGI