| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0721 |
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| Symbol | |
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| ID | 5198317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 797255 |
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| End bp | 799363 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580265 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001261226 |
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| Protein GI | 148553644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00760072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCCTTG TCCGGTCCAG GCTATCAGGA GCGAGAAGCG TGAAATTCAA GGCGGTTTCA
GCGGCCATGC TGGTGGTCGC ACTGGCGTCG TGCGCGCCCC GGAAGGCGGC CAATGTCGAT
TGGGCGCTGC ATGGCCAGGA CGCGGGCGAG AAGCGGTTCA GCGACCTCGG AGAGATCACG
CCCGCCAATG TCGGCCAGCT CGGCGTCGCC TGGTATGCCG ATTTCGACGC GCGCTCGCTG
CGCGGGGTGG AGGGGACGCC GCTGGTCGTC GACGGCGTCA TGTACGCCTC CGGCCCGTGG
AGCAAGGTGA TCGCGCTCGA CGCGCAGAGC GGCAAGAAGC TGTGGGAATA TGATCCGCAG
TTCGACGGGG CGATCGCGCG GCGCGCCTGC TGCGACGTGG TCAATCGCGG CGTCGCCTAT
GCCGACGGCA AGGTGTTCGT CGGCGTCCTC GACGGCCGGC TGGTCGCGCT CGACGCGAAG
ACCGGCAAGC CGGTGTGGAC GGTGCAGACC ACCGACACGA CCAAGTCCTA CACGGTCACC
GGCGCGCCGC GCATCGTCAA GGACAAGGTG GTGATCGGCA ATGGCGGCGC CGAATATGGC
GTGCGCGGCT ACGTCACCGC CTATGACGTC GCGACCGGCA AGCAGGCGTG GCGCTTCTAC
ACCATCCCCG GCGACCCGAA GAAGGGCTTC GAGAACGACG CCATGGCGAT GGCCGCCAAG
AGCTGGAACG GGGAGTGGTG GAAATATGGC GGCGGCGGCA CCGCCTGGGA CTCGATGGCC
TATGATCCCG AGCTCGACCT GCTCTACATC GGCGTCGGCA ATGGCGGCCC CTGGGATCGC
GCCGTGCGCA GCGCCGGCAA GGGCGACAAC CTGTTCCTGT CGTCGATCGT GGCGGTGCGT
CCCTCGACCG GCGAATATGT CTGGCACTTC CAGGAGGTGC CCGGCGACGA ATGGGATTAT
ACCGCCACCC AGCACATGAT CCTCGCCGAC CTCGAGATCG ACGGCAAGCC GCGCAAGGTG
CTGATGCAGG CGCCCAAGAA CGGCTTCTTC TACGTGCTCG ACCGGACCAA CGGCGCCTTC
ATCTCGGGCA CGCCCTATGT CCCCGTCACC TGGGCGAAGG GCCTCGATCC CAAGACCGGC
CGTCCCGACA TCGTGCCCGA GGCGCGCTAT AGCGGCACCG GTAAGCCCTT CCTCGGCATG
CCGTCGCCGG CTGGCGGACA TGGCTGGCAG CCGATGAGCT TCAACCCGAA GACCGGCCTC
GTCTACCTGC CGACCGCTGA GATTCCCTAT GGCTATATCT CCGGCAAGAC GGAGGATTTC
CGCTTCGACC CGCGCGGCTG GAACACTGGG CAGGACCCGG GCAAGACCGC GATGCCCGAG
GACCCGGCGA TCCGGCGGCA GATTCGCGGG ATGATGGGCG GCGCGCTCGT CGCCTGGGAC
CCGAAGGCGC GCAAGCGGGT CTGGTCGGTG CCGATGCCTC TGCCGTGGAA CGGCGGCGTG
CTGTCGACCG CGGCGGGCCT GGTCTTCCAG GGCAACGGCA CCGGCGACTT CGCCGCCTAT
GACGCGACCA GCGGCAAGAA GCTCTGGTCG ATGCCGATGG GGTCGGGGAT CGTCGCCCCG
CCGATCACCT ATTCGGTCGC CGGGGTCCAA TATGTCTCGG TCGCGGTCGG TTGGGGCGGC
ATCCTGCCGC TCAACATGGG CGAGGCGCTC CAGGCCTCGG TGAAGCCCAA GGTCAATCGC
GTCGTGACCT TCCGCATCGG CGGCAAGGCG CCGCTGCCGC TGCCGGCGAA GGAGGCCGAG
GCGCCGCTCG CCCCGCCGCC CTCGACCGCC TCCGCCGCCG TGATCGAGCA GGGACGGGTG
CTCTACCATG TCCGCTGCTG GATGTGCCAT GGCGACACCG TCGTGAACCA TGGCGGGGTT
CCCGACCTGC GCCGCTCGAT GGTGATCGCG GACGCGGCGG CCTTCCGCGG CTTCGTCCTC
GAAGGGGCGG CCGAGCCGCT CGGCATGCCC AATTTCTCGA AGGACCTGAA GCCCGACGAG
GTCGAGGCGA TCCGCGCCTA TGTCATCAAG CGTGCCAACG ACTTGAAGGC CGATCCTAAG
ATGCCGTGA
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| Protein sequence | MSLVRSRLSG ARSVKFKAVS AAMLVVALAS CAPRKAANVD WALHGQDAGE KRFSDLGEIT
PANVGQLGVA WYADFDARSL RGVEGTPLVV DGVMYASGPW SKVIALDAQS GKKLWEYDPQ
FDGAIARRAC CDVVNRGVAY ADGKVFVGVL DGRLVALDAK TGKPVWTVQT TDTTKSYTVT
GAPRIVKDKV VIGNGGAEYG VRGYVTAYDV ATGKQAWRFY TIPGDPKKGF ENDAMAMAAK
SWNGEWWKYG GGGTAWDSMA YDPELDLLYI GVGNGGPWDR AVRSAGKGDN LFLSSIVAVR
PSTGEYVWHF QEVPGDEWDY TATQHMILAD LEIDGKPRKV LMQAPKNGFF YVLDRTNGAF
ISGTPYVPVT WAKGLDPKTG RPDIVPEARY SGTGKPFLGM PSPAGGHGWQ PMSFNPKTGL
VYLPTAEIPY GYISGKTEDF RFDPRGWNTG QDPGKTAMPE DPAIRRQIRG MMGGALVAWD
PKARKRVWSV PMPLPWNGGV LSTAAGLVFQ GNGTGDFAAY DATSGKKLWS MPMGSGIVAP
PITYSVAGVQ YVSVAVGWGG ILPLNMGEAL QASVKPKVNR VVTFRIGGKA PLPLPAKEAE
APLAPPPSTA SAAVIEQGRV LYHVRCWMCH GDTVVNHGGV PDLRRSMVIA DAAAFRGFVL
EGAAEPLGMP NFSKDLKPDE VEAIRAYVIK RANDLKADPK MP
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