Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0717 |
Symbol | fbiC |
ID | 5199479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 792109 |
End bp | 794448 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580261 |
Product | FO synthase |
Protein accession | YP_001261222 |
Protein GI | 148553640 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00851827 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACCG GACATGATCT CGATCGACGG GGCGCCGACG CCATCCTGAC GCGGCTCGAC GCGATGGGCC TCGCGCGGAT GATCGCGGAG AGCGAGGCGA TGACCCTCGC CGCGCACGGG CCGATCGTCA CCTATTCGCG CAAGGTGTTC ATTCCGCTGA CCCGGCTGTG CCGCGACGTC TGCCATTATT GCACCTTCGC CACCACCCCG CGCCAGGCCG GCCCCGCCTA TCTGAGCCGC GACGAGGTGC TGGCGATCGC CCGCGCCGGG GAGGCGGCCG GGTGCCGCGA GGCGCTGTTC ACGCTCGGTG ACCGACCCGA GGACCGCTAT GCGGCGGCGC GCGAGGCGCT GGCGGCGAGC GGCCATGCCA GCACCCTCGC CTATCTTCGC GACATGGCGC GGGCGGTGCT CGACGAGACC GGCCTGCTGC CGCACCTCAA TCCCGGCCTG ATGGACGCCG ACGACTATGC CGCGCTGCGC CCGGTGTCGG CGTCGATGGG GATCATGCTC GAAAGCGCGT CGGACCGGCT GTGCGAGCCG GGCGGGCCGC ATTTCGGATC GCCCGACAAG CGCCCCGCCG CGCGGATCGC GACGATCGAG GCGGCCGGGC GCGCCGGCGT GCCCTTCACC ACCGGCCTGC TGATCGGCAT CGGCGAGACC CGCGCCGAGC GGATCGAGGC GCTGGTCGCG ATCCGCGACC TGCACGCGCG CCACGGCCAT ATCCAGGAAG TCATCGTCCA GAATTTCCGC GCCAAGCCCG ACACCCGCAT GGCCGGCCAT GCCGAGCCGT CGCTCGACGA GCATCTCTGG ACGATCGCCG CCGCCCGGCT GGTGCTCGGC CCCGCCATGA CGATCCAGGC GCCGCCCAAC CTCCACGACC GCGCCGAGCT GACCGCGCTG CTGCGCGCCG GGGTCAACGA CTGGGGCGGC GTGTCGCCGG TCACCCCCGA CCATGTGAAC CCCGAGGCGC CCTGGCCGCA TCTGGAGGTG CTCGCGGAGG CGACCGCCGA GGCGGGACGC ACCCTGCTCC AGCGGCTCGC GATCGGCCCG GCCCATGCCC GCGCGGTCGA CCGCTGGGCC GATCCGGCGC TCGCCACCCG CATCCGCCGC CTCGTCGACG GGCGCGGCCT GCCCAAGACC GACGACTGGG CGGCGGGCGA AGGCGGCGCG GTGCCCGCGA TCGGGCTCGA TGCCGAACCG AAGGCGACCG CCGGGATCGC CGCGATTCTC GCCAAGGCAG GATCGGGCGC GACGCTCGAC GAAGGCGAGA TCGTCGCGCT GTTCCGGGCC GAGCGCGGCG ACCTCGCCGC GATCGTCCGC ACCGCCGACG AACTGCGGCG GCAGGTCAAT GGCGACCGCG TCAGCTATGC CGTCAACCGC AACATCAACT ACACCAACAT ATGTCTATAC AAATGCGGCT TCTGCGCCTT TTCCAAGGGA TCGACCAAGG CCGAGCGCGG TCCCGCCTAT CGGCTCGACC TCGATGAGGT CGGCCGCCGC GCCGCCGAGG CGGCCGAGCG CGGCGCGACC GAGGTGTGCC TGCAGGGCGG CATCCATCCG AGCTTCGACG GCGACACCTA TCTCGCCATC GTCGCTGCCG TCCGCGCCGC CGCGCCGTCG ATCCACATCC ACGCCTTCTC CCCGCTCGAA GTCACCCATG GCGCGCAGAC GCTCGGACTC CCGCTCGAGG ATTATCTAGC GCGGCTGAAG GCGGCCGGTC TCTCGACCCT GCCCGGCACC GCCGCCGAGA TCCTCGATCC CGAGGTCCGC GCGATCCTCT GCCCCGACAA GCTGACCGCC GACGAGTGGA TCGAGGTGAT GCGGACCGCG CACGGCGTCG GCCTGCGCAG CACCGCGACG ATCATGTTCG GCCATGTCGA CGGCTATGAG CATTGGGCCC GCCATCTGCT GCGGGTCCGC GCCTTGCAGA CCGAGACGGG CGGCTTCACC GAGTTCGTCC CCCTGCCCTT CGTCCATATG GAGGCGCCGC TGTGGCGCAA GGGCAAGGCG CGCTCGGGCC CCAGCTATCG CGAGGCGGTG CTGATGCACG CTGTCGCGCG GATCGTGCTG CACCCGGTCA TCGCCAACAT CCAGACGAGC TGGGTGAAGA TGGGTCCCGA CGGCGCGCGC GCGATCCTGG ACGCCGGCGC CAACGACCTG GGCGGCGTGC TGATGGACGA ATCGATCACG CGCTCGGCCG GCGGCCAGAA CGGCCAGTGC TTCGATCGCG CGCAGATGAT CGCGCTCGCC GCCGACGCCG GCCGGCCGGC CTATCAGCGC ACCACGCTTT ACCAGCCGGT CGATCCGCGG CCGGCCCCCT TCCTGGAGCC TCTTGCATGA
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Protein sequence | MATGHDLDRR GADAILTRLD AMGLARMIAE SEAMTLAAHG PIVTYSRKVF IPLTRLCRDV CHYCTFATTP RQAGPAYLSR DEVLAIARAG EAAGCREALF TLGDRPEDRY AAAREALAAS GHASTLAYLR DMARAVLDET GLLPHLNPGL MDADDYAALR PVSASMGIML ESASDRLCEP GGPHFGSPDK RPAARIATIE AAGRAGVPFT TGLLIGIGET RAERIEALVA IRDLHARHGH IQEVIVQNFR AKPDTRMAGH AEPSLDEHLW TIAAARLVLG PAMTIQAPPN LHDRAELTAL LRAGVNDWGG VSPVTPDHVN PEAPWPHLEV LAEATAEAGR TLLQRLAIGP AHARAVDRWA DPALATRIRR LVDGRGLPKT DDWAAGEGGA VPAIGLDAEP KATAGIAAIL AKAGSGATLD EGEIVALFRA ERGDLAAIVR TADELRRQVN GDRVSYAVNR NINYTNICLY KCGFCAFSKG STKAERGPAY RLDLDEVGRR AAEAAERGAT EVCLQGGIHP SFDGDTYLAI VAAVRAAAPS IHIHAFSPLE VTHGAQTLGL PLEDYLARLK AAGLSTLPGT AAEILDPEVR AILCPDKLTA DEWIEVMRTA HGVGLRSTAT IMFGHVDGYE HWARHLLRVR ALQTETGGFT EFVPLPFVHM EAPLWRKGKA RSGPSYREAV LMHAVARIVL HPVIANIQTS WVKMGPDGAR AILDAGANDL GGVLMDESIT RSAGGQNGQC FDRAQMIALA ADAGRPAYQR TTLYQPVDPR PAPFLEPLA
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