Gene Swit_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0712 
Symbol 
ID5197094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp784841 
End bp785983 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID640580256 
Productaldo/keto reductase 
Protein accessionYP_001261217 
Protein GI148553635 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000693877 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCATTC CCCGCGTAAA TCTGCGCCCC GATTTCTCGG TTCCCCGCGT CATCAAGGGA 
AACTGGCAGA TCGCCGACGA CCATAGCAGC AGCGTGCGCG ACGACGACGA CATGCATCGC
CACATGGTGT CCTTCGTCGA TGCGGGGATC ACCGCCTTCG ACTGCGGCGA CGTCTATTAT
GGGGTCGAGG AGCGGATCGG CCGCTTCATC GAGCGCTTCC GCCGCGAGCG CGGCCCCGCC
GAAGCGTCGA AGATCGCGGT CCATACCAAA TATATCCCGG CTTTCCTCCA GGAGGAGGAG
CTGCGCAACC ACGGCCGCCA GACCATCGTC GACACGATCG ACCGCTCGCT CGCCCGGCTG
AAGGTCGAGC GGCTCGACCT CGTCCAGCTC CACTGGTGGA ACTACGAGAT CGACGGCAAT
GTCGAGACCG CGCTGATCCT CAAGGAGCTC CAGCAGGCGG GCAAGATCCA CCATATCGGC
GGTACCAACT ACAATGTCGC CGAGCTGGCC AGGATGGTCG ATGCCGGTGT CGATATCGTC
GCCAACCAGG TGCAATATTC GCTGACCGAC CGCCGCCCCA AGAACGGCAT GGAGCAATAT
TGTGCCGAAA ACGACATCCA GCTCCTCTGC TATGGATCGA TCGGCGGCGG GCTGATCTCG
TCCAAGTGGC TCGGCATCCC CGATCCGGGC AAGCCGACCT TCGAAAATGT CTCGCTCGAC
AAATATTACC GCATCATCGT CGACTTCGGC GGCTGGGCGC TGTTCCAGGA GCTGCTGCGC
ACGCTCGACG CGATCGGCGC CAGGCATGGC GTCGCGATCC CGGCGGTCGC CAGCCGCTAC
GTCCTCGACC AGCCGAGCGT CGCCGCGGTG ATCCAGGGCG CCCGGCACGA CCGGCACCTC
GCCCAGAATC TCAAGCTGTT CGAATTCGCG CTCGACGAGG AGGACCGGCA GGCGATCGAT
GCGGTGCTCG CGCGTTCCAC CGGGCCGGCG GGCGACTGCT ACGACCTCGA CCGCATCGAG
GATCGCGACG CGATCGAGAA TGTCGCGACC GACTATTTCG ACGTCGAGGA CGGCAAGCTC
GTCACCCGCC ATCGCGATCC GGTCGTGCTC GCCGAACCCT ATGGACATCA CATCAAGGCG
TGA
 
Protein sequence
MTIPRVNLRP DFSVPRVIKG NWQIADDHSS SVRDDDDMHR HMVSFVDAGI TAFDCGDVYY 
GVEERIGRFI ERFRRERGPA EASKIAVHTK YIPAFLQEEE LRNHGRQTIV DTIDRSLARL
KVERLDLVQL HWWNYEIDGN VETALILKEL QQAGKIHHIG GTNYNVAELA RMVDAGVDIV
ANQVQYSLTD RRPKNGMEQY CAENDIQLLC YGSIGGGLIS SKWLGIPDPG KPTFENVSLD
KYYRIIVDFG GWALFQELLR TLDAIGARHG VAIPAVASRY VLDQPSVAAV IQGARHDRHL
AQNLKLFEFA LDEEDRQAID AVLARSTGPA GDCYDLDRIE DRDAIENVAT DYFDVEDGKL
VTRHRDPVVL AEPYGHHIKA