| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0709 |
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| Symbol | |
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| ID | 5198182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 778817 |
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| End bp | 781189 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580253 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261214 |
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| Protein GI | 148553632 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.072981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00423974 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTATC GCCATGCAAA GATGATCTTG CTGTCGGGTT GCGCCATCGC CCTTTGCAGC
GGTCTGCAAC CGGCCGCCGC GCAGGTCGAG GAAGAAGGCG CTCGCTCGGG CGGGCTCGAG
GATATCGTCG TCACGGCGCG CCGTCGGGCG GAATCGGTGC AGACGACGCC GCTGTCGGTG
TCGGCCTTCG ACTCCCGCTC GCTCCAGGAT CGCGGCTTGC AGAACATCGC CGACGTCTCG
CGCGCCGTGC CGAACGTCCA GCTCGATCCG GTCGCCAACG AATCCGGCGT TGCGTCGACC
CAGATATCGA TCCGCGGCAT CGGCCAGACC GACTATGTGC TGACCGTCGA GCCCGGCGTC
GCCGTCTATC TGGACGGCGT CTATGTCGGC AAGTCGCTCG GCTCGCTGCT CGACACGGTG
GACGTCGAGC GCGTCGAGAT CCTGCGCGGC CCGCAAGGCA CGCTGTTCGG CAAGAACACG
ATCGGCGGCG CGATCCAGGT GATCACCAAG CGCCCGACCG CCGACAACCA GGCCGAGATG
GAACTGACCA CCGGGCGCTA CGACCGGCTC GACGCGCGCG GCGCGATGTC CGGCCCGATC
ACCGACTGGC TGCGCTTCCG CCTGTCCGCC TCCTATCAGA GCCGCGACGG CTTCATGAAG
CGCATCCTGC GCAGCGGCGA GCGGACCGGC GAGGTCCAGG GCGACATGAA CCGGCTGGGC
GGGCGGCTCG TCTTCGAAGC CGACGTCGCC CCGAACCTGC TGGCGACGCT GGCCTTCGAC
GGGACGCGCA TCCGCGAGAA GTCGCCGGCG ACCTATCTGC GGCGGGTGAC CGAGGATGCG
GGCTTCCCGC GCCTGTTCAA CCTGGCGGTG CCGGGCGGCG TCTGCGCGCC GGCGGCGGGG
GCGTCGCGCT TCTCCAACCC CTATTGCTTC AACGACCAAT ATTCGCTGCC GACCGACACG
CGCGTCACCT ACAATGCCGG CGGCAACACG GCCGACACCG ACGTGCGGGG CGTCGCCCTG
ACGCTCGACT GGAAGCCGGG CGACATCAAC GTCAAGTCGA TCACCTCGTT CCGCAAGGTC
GACGTGTTCG TCGACCAGAA CCTCGGCGGC AGCGCCTATT ACAACAGCCA GGTCGGGCAG
GACATCGACT TCAAGTCGTT CAGCCAGGAA TATCAGCTCA GCGGCAACCT GCTCGACAAG
CGGCTGTCCT ACGTCCTCGG CGCCTATTAC CAGCGCGAAT GGGGGCGGCA GCTCTTCCCG
GTCCAGACCG CGCTCGCGCA GTTCCTGTCG GGCGGCGACA TCAAGAACGA CAGCTATGCC
GCCTTCGGCC AGCTCACCTA TGAGATCACC AGCAGGCTCT CGCTGACCGG CGGCTTCCGC
TACACCTATG AGACGCGCCG GTTCAATCCG GGCCTCCAGC ACGTCATCGG CTATGACGAC
CTGTCGGTGA TCAAGATCCC GGGCTTCGTG AATCCCGTCG CCAACGCCTT CGGCACGCCC
GGCACGCCGC TGTTCCCGGC GGGCTGGTAC AAGCGCAACA GCAAGGCCGG CACGCCGATG
ATCTCGCTGA GCTACAAGCC GGTCGACGAC GTGATGCTCT ATGCGACCTA TTCGAAGGGC
TTCAAGGGCG GCGGCTTCAC CATGCGCTTC TTCCCGCCGG TCAAGCCGGC GGCGGGCGTC
GATCCCGATA CGCTGATCCC CTATGCCAAG CCCGAAAAGG CGACCTCCTA CGAGGCCGGC
ATCAAGAGCG AGTGGCTCGG CGGCAAGCTG CGCCTGAACG TCGCCGGCTT CATCACCGAC
TACAACAACA TCCAGGTCAC CTACACGATC GATCCGGACG GCCCGGGCCC GATCGGCCGC
TTCCTGCCGG TGCTTGCCAA TTCGGGTTCG GCCCGCATCA AGGGCATCGA GGTCGAGAGC
GCGGCGGTGC CGACCGACTG GCTGCGGATC GACGGCAGCC TCGGCTATAT CGACGCCAAA
TACCGCAAGT TCACCGCGGC GGCGATCGGC GCCTATCCCG CCGCGCTGGG CTTCGACCTG
CCCAACACGC CGAAATGGAC CTATAATGTC GGGACGACGG TGACCTTCTT CGACAATGAG
TCGGGCAATG TCTTCCTGCG CGCCGACTGG GCCTATCGCA GCAGCCAGTT CAAGGAGTTC
TCGAACAACC CGTCGCTGTT CCAGAAGGGC TACGGCATCC TCAACGCGGG GCTGACCTAC
CGGTCCGCCG ATCGGAACTG GGACGTGACG CTGGGCGGCA CCAACCTGAC CGACAAGGCC
TATATCGTCA GCGGCGTCGC CAGTTCCGAT CGCGCGCAGG CGGTGCGGTC GCGGCCGCGC
GAATGGTATC TGACGCTGCG GCACAAGATA TGA
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| Protein sequence | MNYRHAKMIL LSGCAIALCS GLQPAAAQVE EEGARSGGLE DIVVTARRRA ESVQTTPLSV
SAFDSRSLQD RGLQNIADVS RAVPNVQLDP VANESGVAST QISIRGIGQT DYVLTVEPGV
AVYLDGVYVG KSLGSLLDTV DVERVEILRG PQGTLFGKNT IGGAIQVITK RPTADNQAEM
ELTTGRYDRL DARGAMSGPI TDWLRFRLSA SYQSRDGFMK RILRSGERTG EVQGDMNRLG
GRLVFEADVA PNLLATLAFD GTRIREKSPA TYLRRVTEDA GFPRLFNLAV PGGVCAPAAG
ASRFSNPYCF NDQYSLPTDT RVTYNAGGNT ADTDVRGVAL TLDWKPGDIN VKSITSFRKV
DVFVDQNLGG SAYYNSQVGQ DIDFKSFSQE YQLSGNLLDK RLSYVLGAYY QREWGRQLFP
VQTALAQFLS GGDIKNDSYA AFGQLTYEIT SRLSLTGGFR YTYETRRFNP GLQHVIGYDD
LSVIKIPGFV NPVANAFGTP GTPLFPAGWY KRNSKAGTPM ISLSYKPVDD VMLYATYSKG
FKGGGFTMRF FPPVKPAAGV DPDTLIPYAK PEKATSYEAG IKSEWLGGKL RLNVAGFITD
YNNIQVTYTI DPDGPGPIGR FLPVLANSGS ARIKGIEVES AAVPTDWLRI DGSLGYIDAK
YRKFTAAAIG AYPAALGFDL PNTPKWTYNV GTTVTFFDNE SGNVFLRADW AYRSSQFKEF
SNNPSLFQKG YGILNAGLTY RSADRNWDVT LGGTNLTDKA YIVSGVASSD RAQAVRSRPR
EWYLTLRHKI
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