Gene Swit_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0700 
Symbol 
ID5196299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp766969 
End bp768111 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID640580244 
Producthypothetical protein 
Protein accessionYP_001261205 
Protein GI148553623 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.155862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0832434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG TGGCCCAGGC GATCTCCTTC GCGTCCAGCC ATGCCGAGGC GCCCGACGAT 
GCGATGCGCG AGATCGCCGC CGCGATCGGC GACGAGCCGC TGGCCGGGGC GGTCGTCTTC
TGCTCGCACC GCTTCGATCG CCTCGCGCTG GCGCGGGCGA TCAACCTGGC GACCGAAGGG
ACGCCGGTGA TCGGCTGCAC CAGTTCGGGC GAGCTCACCC GTGGCGGCTA TGACGAGGGC
AGCCTCAGCC TGATCGGCTT TCCGAGCAGC GGCTTCCATT TCGTCTCGCA CTGCTTCGAC
GACATCGAGG CGTTCGACCC GATCGAGGCG CGCGAGGCGG TTCGCGCGCT GGCCGCCGTC
GCCGATCGCG ACAGCCGCCG GCTGGGCGAC GCCATCAACC ATGTCGCATT GTTCCTGGTC
GACGGCCTGT CGCACCGCGA GGAATTGCTG ACGATGACGA TCCAAGACGC GCTGGGCGAC
ATCCCGCTGA TCGGCGGATC GTCGGGCGAC GGCCTGGCCT TTCGCGAGAC CGCGATCTTC
GAGGGCGGCC GCTTCCACCG CCGCGCGGCG GTGGTCGCGA TCCTCTCCTC GCCGCGTCCG
ATGCACGTCT TCAAGGCGCA GCATTACCAG CCCGGCGAAA GCAAGATGGT GATCACCGGC
GCCATCCCGC ACGAACGCGT CGTCACCGAG ATCAACGCCG AGCCCGCCGC GCAGGAATAT
CTGCGCCTGG CGGGCCATGC GGGCGAGGCG CTGGGCGTCG CCTTCTACGC CGCGCATCCG
CCGATGGTGC GCGCGGGCGG CGAATATCAT GTCCGCTCGA TCCAGAGCGC CAATCCGGAC
GGCAGCCTGA CCTTCTACTG CGCGATCGAC GAGGGGATCG TCCTGACGGT CGGCGAGCCG
GTCGACCGCA TCGCGCGGAT GGAGGCGCTG TTCGGCGACA TCCGCGAGCG GGTTGGCGAG
GTTGACCGGA TCATCGCCTT CGATTGCGTG CTCAACCGGA TCGATGCCGA GCAGCGCCAG
CTCGGCAGCA GGGTGTCGGC GCTCTACGGC GCCAACCGGG TGATCGGCTT CAACACCTAT
GGCGAGCAAT ATCACGCGCT GCACGTCAAC CAGACCTTCA GCGGGCTGGC GATCGGGAAA
TGA
 
Protein sequence
MTTVAQAISF ASSHAEAPDD AMREIAAAIG DEPLAGAVVF CSHRFDRLAL ARAINLATEG 
TPVIGCTSSG ELTRGGYDEG SLSLIGFPSS GFHFVSHCFD DIEAFDPIEA REAVRALAAV
ADRDSRRLGD AINHVALFLV DGLSHREELL TMTIQDALGD IPLIGGSSGD GLAFRETAIF
EGGRFHRRAA VVAILSSPRP MHVFKAQHYQ PGESKMVITG AIPHERVVTE INAEPAAQEY
LRLAGHAGEA LGVAFYAAHP PMVRAGGEYH VRSIQSANPD GSLTFYCAID EGIVLTVGEP
VDRIARMEAL FGDIRERVGE VDRIIAFDCV LNRIDAEQRQ LGSRVSALYG ANRVIGFNTY
GEQYHALHVN QTFSGLAIGK