| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0694 |
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| Symbol | |
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| ID | 5197845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 760566 |
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| End bp | 761324 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580238 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001261199 |
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| Protein GI | 148553617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.770061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.351457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCATT GGGGGCGCGG CGGACCACAG GCGCGGCTTG CCGCGCGCCC GATAATGTCG
GATCATCCGT TGCGGGGTAA CATGATGCAG GACGACATGG TCGCCGACGC GACGATGGAA
CGCATATTGA TCATCGACGA TCATCCGCTG GTCCGCGACG GCCTGCGGAG CGTGATCGCG
GTGACCTTCG ACGGGTGCGA GATATTCGAG GCCGCGTCGA TGGACGAGGC GCTCGCCACG
CTGGAGAAGC AGAGCAACTT CGACCTGATC CTGCTCGACC TCAACATCCC CGACGTGAAG
CGGCTCGACG GGCTGCGCCT GCTCCGCTCG CGCTATCCGA TCCTGCCGGT GGTGATGGTC
TCGGGCGCGT TCGACCGCGC GATCATCCAG GAGGCGCTGG GCGCCGGCGC CGCCGGCTTC
ATCCCCAAGT CGATGAAGCG CAGCCTGATC GTCGACGCGC TCCACCGCAT CGTCTCGGGC
GAGATCTACC TCCCCGCCGC GATCGGCGAG CCGGCCGAGA TCGCCTCGGA GGAAGCCGAC
ATATTGCAGC GGATCGAAAG CCTGACCCCG CAGCAGAAGA CCGTCCTCGT CCAGCTCGTC
AACGGCCGCC TCAACAAGCA GATCGCCCAC GATCTCAGCG TGTCGATGAC CACCGTGAAG
GCGCATGTCT CCGCCATCCT CCAGAAGATG GGGGTGTTCA GCCGGACGCA GGCGGTGATC
AAGGCCAACC GGGTGCATTT CACGGGGGAG GAGTTCTAG
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| Protein sequence | MIHWGRGGPQ ARLAARPIMS DHPLRGNMMQ DDMVADATME RILIIDDHPL VRDGLRSVIA
VTFDGCEIFE AASMDEALAT LEKQSNFDLI LLDLNIPDVK RLDGLRLLRS RYPILPVVMV
SGAFDRAIIQ EALGAGAAGF IPKSMKRSLI VDALHRIVSG EIYLPAAIGE PAEIASEEAD
ILQRIESLTP QQKTVLVQLV NGRLNKQIAH DLSVSMTTVK AHVSAILQKM GVFSRTQAVI
KANRVHFTGE EF
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