Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0693 |
Symbol | |
ID | 5197844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 758813 |
End bp | 760552 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640580237 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001261198 |
Protein GI | 148553616 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.804984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.410128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAT CCATGCTGCG CACGCTGGCC GGGGCGGCCG CGCTCGCGCT GGTGGCGGCG ACGGCGCCGA CGCAGGCGAA CGGCCCCACC GACGCCGATC TGATGAACGA CGCCGCCTCG ACCGGCGACG TGCTGACCTA TGGCATGGGC CCGCGCGCGC AGCGCTTCAG CCCGCTCAAG GCGATCAGCA CCGACAATGT CGCCAAGCTG GTCCCCGCCT TCTCCGCCTC GCTCGGCGGC GAGAAGCAGC GCGGCCAGGA GGCGCAGCCG ATCGTCTATG ACGGCACCAT CTACGTCACC GGCAGCTATT CGCGCGTCTT CGCCTTCGAT GCCCGCACCG GCGAGGAGAA GTGGCAATAT GACGCCCGCC TGCCCGAAGG GATCATGCCC TGCTGCGACG TGGTGAACCG CGGCGCCGCC ATCTATGGCG ACAAGATCAT CTTCGCGACG CTCGACGCGC ATCTCGTCGC GCTCAACCGC GAGACCGGCA AGGTCGTCTG GAACAAGAAG GTCGCCGACT ACCAGGCCGG CTACAGCGCC ACCGCCGCGC CGATCATCGT CAAGGGCAAG GTGATCTACG GCAATTCGGG CGGCGAGTTC GGCATCGTCG GCGCGGTCGA GGCGCGCGAC GTCGAGACCG GCGAGCTGGT CTGGCGCCGT CCGACGATCG AAGGCCATAT GGGCTCGCTG GGCGGCAAGG ACAACGGCAT CACCGGCAAG CTCAACGCGA GCTGGCAGGG CGACCTGTGG AAGACCGGCG GCGGCGCGAC CTGGCTCGGC GGCACCTATG ATCCCGAGAC CAACCTGCTC TATTTCGGCA CCGGCAATCC GGCGCCGTGG AACAGCCACC TGCGCCCCGG CGACAATCTC TACACCTCGT CGACGCTCGC CATCGATCCC GACACCGGCG TGATCAAATG GCATTTCCAG ACCACGCCGC ACGACGGCTG GGACTTCGAC GGCGTCAACG AGTTCATCCC GTTCGACGCG ACGATCAACG GCAAGCCGAT GAAGCTGGGC GCGAAGGCCG ACCGCAACGG CTATTTCTTC GTGCTGGACC GCACCAACGG CAAGTTCATC GGCGCGCACA AATTCGTGAT GCAGACGACC TGGGCCAACG GCTTCAACGC CAAGGGCCGT CCCAATTATG TCGACGCCAA CCGCCCCGGC GCGCCGACCG CCGAGAAGGG CACCAGCGTC TTCGCCTCGC CCAGCTTCCT CGGCGGCAAG AACTGGATGC CGATGGCGTA CAGCCAGGAC ACCGGCCTGT TCTACATCCC GTCGAACGAC TGGGGCATGG ACATCTGGAA CGAGCCGATC GCCTACAAGA AGGGCGCCGC CTATCTGGGC GCGGGCTTCA CGATCAAGCC GATCGCCGAG GACCATATCG GCGCGCTGCG CGCGATGGAC CCGAAGACCG GCAAGATCGT GTGGGAGTAC AAGAACAAGG CGCCGCTGTG GGGCGGTGTC CTGACCACCG CAGGCAACCT CGTCTTCACC GGCACGCCCG AGGGCTATCT GAAGGCGTTC GACGCGAAGA CCGGACAGGA GCTGTGGAAG TTCCAGACCG GATCGGGCGT CGTCGGGTCG CCGGTCACCT GGGAACAGGA CGGCGAGCAA TATGTCGCGG TGATGTCGGG CTGGGGCGGC GCGGTGCCGC TGTGGGGCGG CGAGGTCGCC AAGTCCTTCA AGGACATCAA CCAGGGCGGC TCGCTCTGGG TGTTCAAGCT CGCGAAGTGA
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Protein sequence | MKGSMLRTLA GAAALALVAA TAPTQANGPT DADLMNDAAS TGDVLTYGMG PRAQRFSPLK AISTDNVAKL VPAFSASLGG EKQRGQEAQP IVYDGTIYVT GSYSRVFAFD ARTGEEKWQY DARLPEGIMP CCDVVNRGAA IYGDKIIFAT LDAHLVALNR ETGKVVWNKK VADYQAGYSA TAAPIIVKGK VIYGNSGGEF GIVGAVEARD VETGELVWRR PTIEGHMGSL GGKDNGITGK LNASWQGDLW KTGGGATWLG GTYDPETNLL YFGTGNPAPW NSHLRPGDNL YTSSTLAIDP DTGVIKWHFQ TTPHDGWDFD GVNEFIPFDA TINGKPMKLG AKADRNGYFF VLDRTNGKFI GAHKFVMQTT WANGFNAKGR PNYVDANRPG APTAEKGTSV FASPSFLGGK NWMPMAYSQD TGLFYIPSND WGMDIWNEPI AYKKGAAYLG AGFTIKPIAE DHIGALRAMD PKTGKIVWEY KNKAPLWGGV LTTAGNLVFT GTPEGYLKAF DAKTGQELWK FQTGSGVVGS PVTWEQDGEQ YVAVMSGWGG AVPLWGGEVA KSFKDINQGG SLWVFKLAK
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