| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0680 |
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| Symbol | |
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| ID | 5196123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 741947 |
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| End bp | 744208 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580224 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261185 |
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| Protein GI | 148553603 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.915685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.983563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACATC TTGCAGGGGC AAACACATCG TTCAGGGCAT GTCTGCTGGC GGGGATCGGG
CTGTCGATCG CCGTCCCGGC GGCGGCGCAA TCGCCCGCCG CGGAGACCGG CGACATCATC
GTGACCGCGC TCAAGCGCGA CACCACGCTG CAGGACACGC CGATCGCGAT CTCGGCGGTG
ACCGGGGAGA CGCTCACCAA GTCGGGCGTC AGGGACATAG GCGCGCTCAA CGCGCCCAGC
CTCAACTTCG TCGATGGCGG CCCCTCCTCC CGGCGCGTCG TCATCCGCGG CATCCAGGCC
GCGGGCGAAC CGACGGTCGG CGTCTATTAT GACGAGACGC CGGTGACCGG CGCGCTCGGC
GCGGGCAACG ACGCCGGGTC GAACACGCCC GAACTGCGCC TGTTCGACGT CGAGCGGGTC
GAGGTGCTGC GCGGCCCGCA GGGGACGCTC TACGGCTCCG GGTCGATGGG CGGCACCCTG
CGCATCATCT ACAACAAGCC GGTGTTCGAG ACCCGGATGG CGGCCGACGT CAGCCTTTCG
GGGACCGAGG ACGGCGGCTT CAACTATCTC GGCAACGCGA TGGTCAACGT TCCGCTGATG
CAGGACGTGA TGGCGCTGCG CGTGACCGGC TTCTACGGCC GCGACGCCGG CTATATCGAC
AATGTCGCGC TGGGCATCGA CAACATCAAC AAGACCAAGG TCTATGGCGG CCGCGCGCAG
CTTCGCATCG TGCCGACCTC GGCGCTGAAG CTCGACCTCG CCGCCTTCGT CAACCGGTCG
CGCACCGACA CGCCCTCCTG GGCGCTGGAG GCGGGCCGCT ACAAGACCGA CAGCCTGACC
CGCCAGCCGC GCCGCGACGA TTTCGAACTC TACAGCGGCA CCGCCAACTG GGATCTCGGC
GGCGTGGTGG CGACGGGCGT GCTGTCCTAC GCGCATCTGC GCTCGGTCGC CGCCAACGAC
GTGTCGCGCT ACCTGGCGGG CAACCGCAGC CCCGGCGCCT GCGCGGCGCT GGTCAACGCC
AACACCCCGT GCGGCGCCGA CAAGCTCGCC GACTTCTACG CACTGGTCGA CGATCAGGTG
CCGAGCGCGC TCGATCCCGA CCAGACGGTC AAAACGCTGA CGACGGAATT GCGGCTCAGC
TCGGACGGCA AGGGGCCGCT CAACTGGACG GTCGGCGGCT TCTATTCGCG GCGGCACAGC
CTGCTCGCCA ACCGCCACCT CCATGCCGAT CCGGTGACGG GCGAGCTGCA GCCCGGCCGG
CCGCTGCTGG TGCTGCGCAA CGTCGACGAC CTGCTGAAGC AGGTGGCGGC GTTCGGCGAA
CTGTCCTGGG ACCTCACCGA TCGCCTCAAC CTGACGGCGG GCATCCGCTA CTTCAAATAT
GACAAGGTCG TCTCGGGCGA GACCCCGATC GGCAACGTGC TGGTGCGGTC GGCGGTGCTG
CCGCTCACCA CCGTCACGTC GAGCGAGGAC GGCACGACGC TGAAGTTCAA CGCCTCCTAC
AAGATCACCC GCGACGTCAT GGTCTATGCG GGGGCGGCGC AAGGTTTCCG GCCGGGCGGC
CTCAACCAGG TGATCGGGCT CGATCCGTCG CTGGCGCCCT ATCGCTCGGA CAATGTCTGG
AATTACGAGC TGGGCATCAA GAGCACCTTG TTCGACCGGC GGCTGACCCT CAACGCCGAC
GTCTTCCAGA TCGACTGGAG CGACATCCAG ATCACCGGCA CCACCCCCAA CGGCGCCTTC
CGCTTCATCA CCAATGCGGG TTCGGCGCGG GTCAAGGGGA TCGAGGCCGA AGCGTCGCTG
CGGCCGGTCG ACGGCCTGCT GCTCGAAGCC AACGGCTCCT ATATCGACGC CAAGCTGACG
ACCGACCAGA AGACGGCGAC CGTCTCCGCG CCGGGCAAGG CCGGGGACCG CATCCCCTAT
GTGCCGAAGC TCACCGGATC GGTCGCGGCC GAATATCGCT GGGCGGTCGG CGGCGATCTC
GGCGCGATGG TGCGGATCGA CCTGCGCCAT GTCGGCAGCT CGTTCTCCGA CTTCCGGCCC
ACCGGCACCT TCACCCGCCG CCTCGGCGCC TATGAGCTGG TCAACGCCCG GATCGGCCTG
CAGGCCGAGG ACGGCCGGTG GGGCGCCTAT CTGTTCGCCA CCAACCTGTT CGACAAGGTG
GCGGTGACCC GATCGACCGC CAGCGCGCTG ACCGGCGGAC GGACCTTCGT CAACACCGTC
GCGCCGCGCA CCATCGGCAT CAACCTGCGG ACCGATTTCT GA
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| Protein sequence | MRHLAGANTS FRACLLAGIG LSIAVPAAAQ SPAAETGDII VTALKRDTTL QDTPIAISAV
TGETLTKSGV RDIGALNAPS LNFVDGGPSS RRVVIRGIQA AGEPTVGVYY DETPVTGALG
AGNDAGSNTP ELRLFDVERV EVLRGPQGTL YGSGSMGGTL RIIYNKPVFE TRMAADVSLS
GTEDGGFNYL GNAMVNVPLM QDVMALRVTG FYGRDAGYID NVALGIDNIN KTKVYGGRAQ
LRIVPTSALK LDLAAFVNRS RTDTPSWALE AGRYKTDSLT RQPRRDDFEL YSGTANWDLG
GVVATGVLSY AHLRSVAAND VSRYLAGNRS PGACAALVNA NTPCGADKLA DFYALVDDQV
PSALDPDQTV KTLTTELRLS SDGKGPLNWT VGGFYSRRHS LLANRHLHAD PVTGELQPGR
PLLVLRNVDD LLKQVAAFGE LSWDLTDRLN LTAGIRYFKY DKVVSGETPI GNVLVRSAVL
PLTTVTSSED GTTLKFNASY KITRDVMVYA GAAQGFRPGG LNQVIGLDPS LAPYRSDNVW
NYELGIKSTL FDRRLTLNAD VFQIDWSDIQ ITGTTPNGAF RFITNAGSAR VKGIEAEASL
RPVDGLLLEA NGSYIDAKLT TDQKTATVSA PGKAGDRIPY VPKLTGSVAA EYRWAVGGDL
GAMVRIDLRH VGSSFSDFRP TGTFTRRLGA YELVNARIGL QAEDGRWGAY LFATNLFDKV
AVTRSTASAL TGGRTFVNTV APRTIGINLR TDF
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