| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0646 |
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| Symbol | |
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| ID | 5199709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 700563 |
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| End bp | 702341 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580190 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001261152 |
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| Protein GI | 148553570 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.35294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGC GCGACCCGAA TCCCGAGACG TCCGAGCGCA AGCTCGGCGA GTTGACGATG
ATCTGGCGCT TCGCGCGCCG CTATCCGGGA AGGATCGCCG CGGCGCTGGC CGCGCTGGTG
GTCGCCGCCT GCGCGACGCT GGCCATCCCC GGCGGCTTCC GGCTAGTGAT CGACAAGGGC
TTCATCGCCT CGGGCGGCGA CGTCGGTCCC TATTTCCACT ATCTGCTGCT GATCGTCCTG
GTGCTGTCGC TGGCGACCGC GACCCGCTTC TACTTCGTCT CGTGGATGGG CGAGCGCGTC
GTCGCCGACA TCAGGATCGC GGTGCAGGCC AACCTGCTGC GCCTCGCGCC GCGCTTCTTC
GAGGAGAACC GGCCGTCGGA GATCGCGTCG CGCCTGACCG CCGACACCGC GATCATCGAG
CAGGTGGTGG GCACGACCGT GTCGGTCGCG CTGCGCAACA TCGTGCTGGC GATCGGCGGG
ATCATCTACC TGTTCGCGAT CGCGCCCAAG CTGGCGGCGA TGCTGCTGCT GGGAATCCCG
GTCGTGATGC TGCCGGTGAT CCTGATGGGC CGGCGGCTGC GCAACCTGTC GCGCAGCACG
CAGGACCGGA TCGCCGATGT CGGCGCCACC GTCTCCGAGA CGCTGCGCGC GATGAAGATC
GTCCAGGGCT TCAACCAGGA ATCGCGCGAG GCCGAGCGCT TCGGCGCGGT GGTCGGCAGC
AGCTTCGACA CCGCGCGGCG GCGCATCCGC ACCCGCGCGG TGATGACCGC GATCATCATC
GGGCTGATCT TCGGGTCGAT CACGATGGTG ATGTGGCAAG GCGCGATCGA CGTCGCGAAC
GGCCGGCTGT CGGGCGGATC GATCGCCGCC TTCATCCTGA CCGGCGGCCT CGTCGCCGGC
GCGTTCGGCG CGCTGGCCGA GGTCTATGGC GACATCGTCC GCGCGGCCGG CGCCGCGGCG
CGACTGTCCG AGCTGCTGAC CGCCGAGGCC GAGATCAAGG CGCCGCCCAA GCCGATCGCC
CTGCCCCAGC CTCCGCGCGG CCGGCTGAGC TTCGACCATG TCGGCTTCCG CTACCCGACC
CGGCCGGAGA TGCTCGCGCT CGACGACGTC AGCTTCACCG TCGAGCCCGG CGAGATGGTC
GCGGTGGTCG GCCCGTCGGG GGCCGGCAAG TCGACGATCC TGCAACTGGC GCAGCGCTTC
TACGACCCCG AAAGCGGCGC GATCCGGCTC GACGGGATCG CCCTGCCCGA TGCCGACCCG
GCCGACATCC GCGCCCGGAT CGCGGTGGTG CCGCAGGAGA CGGTGCTGTT CGGCGCCTCG
GCGCGCGACA ATCTTCGCTA CGGCCGCTGG GATGCCGACG ACGACGCGAT CTGGGCCGCG
GCGGAGGCCG CCAACGCCGC TTCCTTCCTG CGCGCGCTTC CGGACGGGCT CGACAGCTTC
CTCGGCGAAG CGGGCGCGCG CCTGTCGGGC GGCCAGCGCC AGCGCATCGC CATCGCCCGC
GCGATCCTGC GCGACGCGCC GCTGCTGCTG CTCGACGAGG CGACCTCGGC GCTCGACGCC
GAATCCGAGC GGCTGGTGCA GGACGCGCTC GACCGGCTGA TGAAGGAGCG CACGACCATC
GTCATCGCCC ACCGGCTGGC GACGGTGCGG GCCGCCGACC GGATCATCGT GATGGACCAG
GGCCGGATCG TCGAACAGGG CGATCATGCG ACGCTGAGCG CGCAGGGCGG CCTCTACGCG
CGGCTGGCGC GGCTCCAGTT CAACGACGTA GCGGCATGA
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| Protein sequence | MARRDPNPET SERKLGELTM IWRFARRYPG RIAAALAALV VAACATLAIP GGFRLVIDKG
FIASGGDVGP YFHYLLLIVL VLSLATATRF YFVSWMGERV VADIRIAVQA NLLRLAPRFF
EENRPSEIAS RLTADTAIIE QVVGTTVSVA LRNIVLAIGG IIYLFAIAPK LAAMLLLGIP
VVMLPVILMG RRLRNLSRST QDRIADVGAT VSETLRAMKI VQGFNQESRE AERFGAVVGS
SFDTARRRIR TRAVMTAIII GLIFGSITMV MWQGAIDVAN GRLSGGSIAA FILTGGLVAG
AFGALAEVYG DIVRAAGAAA RLSELLTAEA EIKAPPKPIA LPQPPRGRLS FDHVGFRYPT
RPEMLALDDV SFTVEPGEMV AVVGPSGAGK STILQLAQRF YDPESGAIRL DGIALPDADP
ADIRARIAVV PQETVLFGAS ARDNLRYGRW DADDDAIWAA AEAANAASFL RALPDGLDSF
LGEAGARLSG GQRQRIAIAR AILRDAPLLL LDEATSALDA ESERLVQDAL DRLMKERTTI
VIAHRLATVR AADRIIVMDQ GRIVEQGDHA TLSAQGGLYA RLARLQFNDV AA
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