| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0608 |
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| Symbol | miaA |
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| ID | 5200484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 662645 |
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| End bp | 663517 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580152 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001261114 |
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| Protein GI | 148553532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00662923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.431033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGATCC GCCTCGCGGA GATCGCCGAC GGGGTGGTGA TCAACGCCGA TGCGAGCCAG
GTCTATGCCG ACCTGCGGGT GCTGAGCGCC CGCCCCGATC CGGCCGAGGA GGCGCGCGCG
CCACACCGGC TGTTCGGCTA TCGCGACGCG GCCGAGCCTT GCAGCGCCGC CGACTGGGCC
GCCGACGCGA AGCGCGCGAT CGCCGCGGCG CGCGAGGCGG GCAAGCTGCC GATCCTGGTC
GGCGGCACCG GCCTCTACCT GCGCACGCTG ATCTTCGGCA TCGCGCCGGT GCCCGAGATC
GATCCGGCGA TCCGCGCCGA GGTGCGCGCG CTGCCGGTCG AGGCGGCCCA TGCCGCGCTC
GCCGCCGAGG ACCCGGCGAT GGGCCATCTG CGCCCGCAGG ACGCCACCCG CATCGCCCGC
GCGCTGGAGG TGATCCGTTC GACCGGCCGG TCGCTGTCGC ACTGGCAGGC GGAGCTGACC
GGCGGGATCG GCGGCGAGAT CGCCGTCGCC GCCGCGATCG TGCTGCCGCC GCGCGACTGG
CTGCGGGCGC GCTGCGACGC CCGGTTCGAG GCGATGCTCG ATCAGGGCGC GGTCGAGGAA
GTGAAGAAGT TGCGCGCGCG CGGGCTTGAT CCGATGCTCC CGGCCATGCA GGCTATCGGC
GTGCGCGAGA TCGCCGCCTG GCAGGACGGG CTGATCGACC GCGAAACGAT GGTGGCGAAG
GCCCAGGCCG CGACCCGGCA ATATGCCAAG CGGCAATATA CCTGGTTCCG CCATCAGCCG
CCCGCCGCAT GGCAGCGGAT CGATACGCAA CTCAATGATA ACGAGATCGG CAAGATTGCA
ATTAAATTAC GCAATGATGC GTTGACAGAG TAG
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| Protein sequence | MAIRLAEIAD GVVINADASQ VYADLRVLSA RPDPAEEARA PHRLFGYRDA AEPCSAADWA
ADAKRAIAAA REAGKLPILV GGTGLYLRTL IFGIAPVPEI DPAIRAEVRA LPVEAAHAAL
AAEDPAMGHL RPQDATRIAR ALEVIRSTGR SLSHWQAELT GGIGGEIAVA AAIVLPPRDW
LRARCDARFE AMLDQGAVEE VKKLRARGLD PMLPAMQAIG VREIAAWQDG LIDRETMVAK
AQAATRQYAK RQYTWFRHQP PAAWQRIDTQ LNDNEIGKIA IKLRNDALTE
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