Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0601 |
Symbol | |
ID | 5200477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 656089 |
End bp | 656544 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640580145 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_001261107 |
Protein GI | 148553525 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.613999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCTCCG CCTCCACCCT CGACTTCCGC GACGCCCTGC CCGATCGCGG CCGGCTGGCG GGGCTGGACG TCGGCACCCG GACGATCGGC GTGGCGCTGT GCGACGCGGG CTGGACGATC GCCAGCCCGG CCGAGACGAT CCTGCGCGCC AAGTTCAGCG TCGACGCCGC GAAGCTGCGC GCGCTGGTCG CGGCGCAACT GGTGAAGGGG CTGGTGATCG GCCTGCCGCT CAACCTCGAC GGCAGCGATT CGCCGCGCAC CCAGTCGGTC CGCGCCTTCG CCCGCAACGT CGAGCCGTTC GGCCTGCCGA TCCTGCTGTG GGACGAGCGC TGGTCGACCC AGGCGGTGAC GCGCACCCTG CTCGACGCCG ACGCGAGCCG CGCCCGCCGC GCCGAGCTGG TCGACAAGCT CGCCGCCGCC TACATCCTGC AGGGCGCGAT CGACGCGATG ATCTGA
|
Protein sequence | MISASTLDFR DALPDRGRLA GLDVGTRTIG VALCDAGWTI ASPAETILRA KFSVDAAKLR ALVAAQLVKG LVIGLPLNLD GSDSPRTQSV RAFARNVEPF GLPILLWDER WSTQAVTRTL LDADASRARR AELVDKLAAA YILQGAIDAM I
|
| |