Gene Swit_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0601 
Symbol 
ID5200477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp656089 
End bp656544 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content73% 
IMG OID640580145 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001261107 
Protein GI148553525 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.613999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCG CCTCCACCCT CGACTTCCGC GACGCCCTGC CCGATCGCGG CCGGCTGGCG 
GGGCTGGACG TCGGCACCCG GACGATCGGC GTGGCGCTGT GCGACGCGGG CTGGACGATC
GCCAGCCCGG CCGAGACGAT CCTGCGCGCC AAGTTCAGCG TCGACGCCGC GAAGCTGCGC
GCGCTGGTCG CGGCGCAACT GGTGAAGGGG CTGGTGATCG GCCTGCCGCT CAACCTCGAC
GGCAGCGATT CGCCGCGCAC CCAGTCGGTC CGCGCCTTCG CCCGCAACGT CGAGCCGTTC
GGCCTGCCGA TCCTGCTGTG GGACGAGCGC TGGTCGACCC AGGCGGTGAC GCGCACCCTG
CTCGACGCCG ACGCGAGCCG CGCCCGCCGC GCCGAGCTGG TCGACAAGCT CGCCGCCGCC
TACATCCTGC AGGGCGCGAT CGACGCGATG ATCTGA
 
Protein sequence
MISASTLDFR DALPDRGRLA GLDVGTRTIG VALCDAGWTI ASPAETILRA KFSVDAAKLR 
ALVAAQLVKG LVIGLPLNLD GSDSPRTQSV RAFARNVEPF GLPILLWDER WSTQAVTRTL
LDADASRARR AELVDKLAAA YILQGAIDAM I