| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0590 |
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| Symbol | |
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| ID | 5200795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 639809 |
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| End bp | 642214 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580133 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001261096 |
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| Protein GI | 148553514 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1142] Fe-S-cluster-containing hydrogenase components 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.120802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG CGGCTCACGC GGCCAAGCTC GGCATACCGC ACGTCCTGCT CGAAAAGACC
GACCACCTTT CCGATACGAT CTTCAAATAT CAGAAGGGCA AGCACGTCAT GGCGACGCCG
AGCCAGCTCG TGCTGCGCTC GGACGTCGAT TTCGATGCGG GCAAGCGCGA GAAGATCCTC
GGCATCTGGG ACGAGCAGAC CGCCGGCCAC AAGGTCAACG TCCGCTTCAA GAGCGAGGTG
AAGGCGATCA CCGGGCAGAA GGGCGCGTTC GTCCTCACCC TGGCCGACAA GACCGAGATC
CATGCCGAGA CGGTCATCCT GGCGATCGGC ACCCAGGGCA ACCCGAACCT GCTGCGCGCG
CCGGGCATCG AGAGCAGCGG CATCCACGTC CAGTATCAGC TCGACGATCC CGGCGAATAT
GTCGACGAGC ACATCACCGT CGTCGGATCG GGCGACGCCG GCATCGAGAA TGCGCTGGGC
CTCGCGCAGG ACGCGGCGCA GGGCAACATC GTCACCATCC TCAACCGCGG CGCCGATTTC
AGCCGCGCCA AGGGCGCCAA CGTCAAGCTG CTGATGCAGG CGCGCGACGA GGGGCGGATG
AACGTGATGA CCGACACCTC GCCGAACCGG CTCGAGGCGG GGCATCTCGT CCTCGACACC
CGCGACGGCG AGGCGCGCAT CCGCTGCGAC CGCGTGATCG CGCGCATGGG CTCGGCCGCG
CCGCGCAAGT TCATCGAGGA ATGCGGGATC GAGTTCACCA GCCCGGACCG CGAGGCCTTC
CCGACGCTGT CGCCGCAGTT CGAGACGACC AACGCCGGCA TCTACGTGAT CGGCGCGCTG
GCCGGCTATC CGCTGATCAA GCACTGCATG AACCAGGGCT ATGACGTCGT CGAGTTCATC
AACGGCAACA CCGGCCTGAA GCCCGCCGAC GAACCGATCC TCGAAGGCAA ATTCGTCAAC
CTGCCGGTCA AGAAGTCGGT CGACGAGTGG CTGGAGTTCA TCCGCACCAA CGTCCAGATC
CTCAACGACC TGTCGCCGTT GCAGATGCGC GAGTTCATGC TGGACTCCGA AGTCCGCTAC
TACGGCAAGA ACGACATCAT CTTCGAGAAG AACGCGCCGG GATCGTCGCT GTTCTGCATC
GCGCAAGGAT CGGTCGACAT CCCGCTGCCC GACGGCCGCT CGACCGGGAT CGTCATTCCC
GAGGGATCGA TCTTCGGCGA GGTCGGCCTC GTCTCCGGTC GCCGCCGCGG CTCGACGATC
CGCTCGGTCG CCGAGACCAT CGTCGTCGAG ATCCCGCGCA ACGCGATCCT CAAGCTGATG
GCGTCGGTGC CGGGCGTGAA GCGCGCCGTC ACCCGCATCT CCACCGAGCG CCAGCTCCTC
CAGATGTGGC AGTCGGGGCT CCAGCCCGCC GACCTGGCCG AGGTGCTGGA GACCGCCGAG
ATCAAGGGCA TCCGCGCCGG CGAGGCGATC TTCCGCGAGG GCGAGGAAGG CAATGACGTC
TATGTGATCC GGTCGGGATC GGTGGTCGTC GAGAAGGCGA TCGGCGGCAA GCCGGTGTTC
CTCTCCTATG TTCCCGCCGG CAATTATGTC GGCGAGCTCG AACTGTTCGA CAACGGCATC
CGCAAGCAGA CCGTGCGCGC CGCGGTGAAG TCGGAGGTGA TCAAGCTCGG CGGCGATGCG
TTCCGCCGGC TGCTGGAGGC CAAGCCGGAA TTCTTCGCCC GGGCGAAGGT GGCGATCGGC
GAGCGCGAGG ACCTCGCCTC GTTCATCGAG GCGAAGAAGG ACAGCTTCGC CACCGTCGTC
GACATGTACA GCTCGGTCGC GAACTTCCTG GTCGACAACG GCGTCGGCGA GGCGACCGAC
GTGCTGCTGA TCGACGAGAA TCTCTGCGTC GGCTGCGACA ATTGCGAGAA GGCCTGCGCC
GACAGCCATG AGGGCATCTC GCGGCTCGAC CGCGAGGCGG GGCGCACCTT CGCGCATCTC
CACGTGCCGA CGAGTTGCCG CCATTGCGAG CATCCGCACT GCATGGCCGA CTGCCCGCCG
ACCGCGATCC ATCGCGGCCA GGACGGCGAG GTCTATATCG ACGACACCTG CATCGGCTGC
GGCAACTGCC AGCGGAACTG CCCCTATGGC GTGATCCGCA TGGAGAAGGA GCCGCCGCAG
AAGCCTTCCC TGTGGAAATG GTTCCTGTTC GGGCAGGGGC CGGGACCGGG AGAGCCCAGC
CATGACTGGG CCTATGCCAA TGCGACGCCC GGCGTCGAGA AGGCGAAACG CGCGGTCAAG
TGCGACATGT GCTCGGGTAT CGAGGGCGGC CCGAGCTGTG TCCGCGCCTG TCCGACGGGG
GCGGCGATCC GTGTCGCGCC CGAGGAATTC CTGACGGTCG CCCGGCTGCA ACGGGACGAC
GCCTGA
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| Protein sequence | MSAAAHAAKL GIPHVLLEKT DHLSDTIFKY QKGKHVMATP SQLVLRSDVD FDAGKREKIL
GIWDEQTAGH KVNVRFKSEV KAITGQKGAF VLTLADKTEI HAETVILAIG TQGNPNLLRA
PGIESSGIHV QYQLDDPGEY VDEHITVVGS GDAGIENALG LAQDAAQGNI VTILNRGADF
SRAKGANVKL LMQARDEGRM NVMTDTSPNR LEAGHLVLDT RDGEARIRCD RVIARMGSAA
PRKFIEECGI EFTSPDREAF PTLSPQFETT NAGIYVIGAL AGYPLIKHCM NQGYDVVEFI
NGNTGLKPAD EPILEGKFVN LPVKKSVDEW LEFIRTNVQI LNDLSPLQMR EFMLDSEVRY
YGKNDIIFEK NAPGSSLFCI AQGSVDIPLP DGRSTGIVIP EGSIFGEVGL VSGRRRGSTI
RSVAETIVVE IPRNAILKLM ASVPGVKRAV TRISTERQLL QMWQSGLQPA DLAEVLETAE
IKGIRAGEAI FREGEEGNDV YVIRSGSVVV EKAIGGKPVF LSYVPAGNYV GELELFDNGI
RKQTVRAAVK SEVIKLGGDA FRRLLEAKPE FFARAKVAIG EREDLASFIE AKKDSFATVV
DMYSSVANFL VDNGVGEATD VLLIDENLCV GCDNCEKACA DSHEGISRLD REAGRTFAHL
HVPTSCRHCE HPHCMADCPP TAIHRGQDGE VYIDDTCIGC GNCQRNCPYG VIRMEKEPPQ
KPSLWKWFLF GQGPGPGEPS HDWAYANATP GVEKAKRAVK CDMCSGIEGG PSCVRACPTG
AAIRVAPEEF LTVARLQRDD A
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