| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0553 |
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| Symbol | |
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| ID | 5200423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 606511 |
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| End bp | 607683 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580096 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001261059 |
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| Protein GI | 148553477 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.125845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA ATCCGCCCTT GCTCGCCCTG GCGGCGGGCG CCTTCGGGAT CGGCGTGACC
GAGTTCGCGC CGATGGGGCT GTTGCCCGTC ATCGCCCGCG ACCTGGACGT TTCGATTCCC
GCGGCCGGCC TGCTGATCAG CGCCTATGCG CTGGGGGTGC TGCTCGGCGC GCCGCTGATG
ACGCTCACCA CCGGCCGCGT GCCGCGCCGG ACCCTGCTGA TCCTGCTCGC GGCGATCTTC
ACCGTCGGCA ACCTGCTGGC GGCGGTGTCG AACGGCTATG GCATGTTGCT CGTCGCCCGG
CTGATCACCT CGCTCAACCA TGGCGCCTTC TTCGGCGTCG GATCGGTCGT CGCGGCCAGC
CTGGTGCCGG CCGAGCGGCG CGCGGGAGCG GTCGCCGCGA TGTTCATGGG CCTGACGATC
GCCACCGTCG TCGGCGTGCC GCTGGCCACC TGGGCGGGCG ACCAGCTGGG CTGGCGCGCC
TCCTTCTGGG GGATCGCCGG GCTCGGCCTG CTGATCATGG CGGCGTTGCG GCTGACCTTG
CCGGCGATGC CCGCGCCGAG CGGCGGCGAC GCGCTGGCCG AGCTGCGGGT GCTGCGGCGC
GGCCCGGTGC TCGCGGCGCT CGGCCTGACG GTGATCGCGT CGAGCGCGAT GTTCACCGTC
TTCACCTATA TCGCCCCGAT TCTGCGGGAG GAGACTCATG CGTCGCTGGG CTTCGTCACG
GCGATGCTGC TCACCTATGG GGTCGGGATG ACCGTGGGCA ACTGGATCGG CGGGCGTTTC
GCCGACCGTT CGGTCGACCG GACCCTGATC GTCACCCTGG CCTCGCTGGT CGCCGTGCTC
GCCGCGCTGG CGCTGCTGAT GCCCTATGCC GTGCCGACCG CGATCCTCGT CTTCCTGTGG
GGAGCGGTCA ATTTCGCGCT GGTGCCGCCG TTGCAGATCC GGGTGATGTC CGCCGCCGCG
GAGGCGCCGA ACCTTGCCTC CGCGGTCAAT ATCGGCGCCT TCAACCTGGG CAACGCGATC
GGCGCCGCGC TGGGCGGCGC GGTGATCGCG GGCGGGCTCG GCTATCCGGC GGTGGCGCTG
GCCGGCGCGG CGGTATCGGC GCTGGGGCTG CTGGCGATCC TGCTGGGCCG ATCGGGCGAG
GGCGCTCCGG CGCTGGCGGA GGCCCGGCGC TGA
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| Protein sequence | MKFNPPLLAL AAGAFGIGVT EFAPMGLLPV IARDLDVSIP AAGLLISAYA LGVLLGAPLM
TLTTGRVPRR TLLILLAAIF TVGNLLAAVS NGYGMLLVAR LITSLNHGAF FGVGSVVAAS
LVPAERRAGA VAAMFMGLTI ATVVGVPLAT WAGDQLGWRA SFWGIAGLGL LIMAALRLTL
PAMPAPSGGD ALAELRVLRR GPVLAALGLT VIASSAMFTV FTYIAPILRE ETHASLGFVT
AMLLTYGVGM TVGNWIGGRF ADRSVDRTLI VTLASLVAVL AALALLMPYA VPTAILVFLW
GAVNFALVPP LQIRVMSAAA EAPNLASAVN IGAFNLGNAI GAALGGAVIA GGLGYPAVAL
AGAAVSALGL LAILLGRSGE GAPALAEARR
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