| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0522 |
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| Symbol | |
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| ID | 5200598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 565939 |
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| End bp | 567819 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580063 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_001261028 |
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| Protein GI | 148553446 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.200693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGG TTCGGGGGCT CTGGAAACTG CTCGTCGGGA TCAAGGACGG GCTCGTCCTG
ATCGCGATGC TGATCTTCTT CGGGACGCTG TTCCTCGCCT TGTCGATCAA GCCGAACAGT
ACGCTGCCCT CGTCGGGCGC GCTGGTGATC GACCTCGACG GCACGCTGGT CGAGCAGCCC
GCCGAGACCG ATCCGCTGAC GCTGCTGGCC GGCAATGGCG GGATCGCGCG CGAGACGCGG
CTGCGCGACC TCGAACGGGC GCTGCAGGCC GCGGCGGAAT CGAACGGCGT CAAGGCGATC
GTCCTCGACC TCGACAGCTT CGCCGGCGGC GAGCAGGCGA CGATCGCGGC GGCGGGCCGC
GCGCTCGACA AGGCCCGCGC CGCGGGCAAG CCGATCCTCG CTTATGCGAC CGGCTATGGC
GACGACGGCT ATCAGCTCGC CTCCCACGCC ACGGAGGTCT GGCTCAACCC GCTCGGCGGG
GTGATCCTCA CCGGACCGGG CGGCTCCCGG CTCTACTACA AGGGGCTGAT GGACCGGCTC
GGCATCACCG CGAAGATCTA CCGGGTCGGC GCGTTCAAGT CGGCGGTCGA ACCCTATATG
CGATCCGACC AGTCGCCCGA GGCGCGCGAG GCCAACCAGG CGCTCGCCAA CGCGCTGTGG
TCGACCTGGA CGGCCGAGGT CGGCAAGGCC CGGCCCAAGG CCAAGCTCGC CGCCTATGTC
GAACGGCCGA CCGCGATCAT CGGCGAGGCG GGCGGGCGGA TGTCGCAGGC GGCGCTCAAC
GCCGGCCTGG TCGACCGGCT CGGCGACCGC AACGCGTTCG ACTCGCGGGT CGCGGCGATC
GCGGGCTCGG CCGGCGGCTC CAGCCTCAAC GGCTTCAAGG CGATCCCGCT CGATCGCTGG
GCGAGCGCGC ATCCCGAGAA GTCGGGCGGG ACGCCGATCG GCGTGCTGAC CGTCGCGGGC
GACATCGTCG ACGGCGACGC CCCGCCGGGC GCGGCCGGCG GCACCACCAT ATCGGACCTG
CTGCTCGACG AGCTGGGCCG CAAGCGGACC AAGGCGCTGG TCGTGCGGGT CGATTCCCCC
GGCGGATCGG TCACCGGCGC GGAGACGATC CGCTCGGCGA TCCTCCAGGC GAAGGGGCTC
GGCCTTCCCG TCGTCGTGTC GATGGGCGGC CTTGCCGCGA GCGGCGGCTA CTGGATATCG
ACCCCGGCCG ACCGGATCAT CGCCGATCCG GCGACGATCA CCGGCTCGAT CGGCGTGTTC
GGCATCCTGC CGACCTTCCA GGGTTCGCTC GCCAAGCTCG GCCTGTCGGC GGACGGCGTG
AAGACGACGC CGCTGTCGGG CGAGCCCGAC GTCTTCCGCG GCACCTCGCC GCAGTTCGAC
GCGATGATGC AGGGCTCGAT CGAGGATGTG TACCGGCGCT TCACCGGGCT GGTCGCGCAA
TCACGCAAGC TGCCGATCGA GCGCGTTCGC GAGATCGCCG AGGGCCGCGT CTGGGCCGGC
GCCACCGCCC GCCAGATCGG GCTGGTCGAC GGCTTCGGAT CGGTCGACGA CGCGATCGCC
GAGGCCGCGA AGCTCGCCAA GCTCGACCCC GCCAAGGTGC GTCCGCTCTA TATCGAGAAG
CCGCTGAATC CGTGGAAGGA GATGATCCGC TCGCTGATCG ATCCCGACAA TGACAGCAGC
GAGGCCGGCA GCCGCACCTT CTGGGGCGGC GTCGCCAACG GCCCGGACCA GGCGCTGGTC
GTCGCGCTGG CCAATGCCCG GCGCGTGCTG GGCGGGCCGG CGATCCAGGT GCGCTGCCTC
GAATGCGCTT CGGCCGCGAC GCCGCCGCGT CCGGCCGATA TCCGCGCCGC GCGCAGCCTG
CTCGCATGGG CGGTCCGCTG A
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| Protein sequence | MKLVRGLWKL LVGIKDGLVL IAMLIFFGTL FLALSIKPNS TLPSSGALVI DLDGTLVEQP
AETDPLTLLA GNGGIARETR LRDLERALQA AAESNGVKAI VLDLDSFAGG EQATIAAAGR
ALDKARAAGK PILAYATGYG DDGYQLASHA TEVWLNPLGG VILTGPGGSR LYYKGLMDRL
GITAKIYRVG AFKSAVEPYM RSDQSPEARE ANQALANALW STWTAEVGKA RPKAKLAAYV
ERPTAIIGEA GGRMSQAALN AGLVDRLGDR NAFDSRVAAI AGSAGGSSLN GFKAIPLDRW
ASAHPEKSGG TPIGVLTVAG DIVDGDAPPG AAGGTTISDL LLDELGRKRT KALVVRVDSP
GGSVTGAETI RSAILQAKGL GLPVVVSMGG LAASGGYWIS TPADRIIADP ATITGSIGVF
GILPTFQGSL AKLGLSADGV KTTPLSGEPD VFRGTSPQFD AMMQGSIEDV YRRFTGLVAQ
SRKLPIERVR EIAEGRVWAG ATARQIGLVD GFGSVDDAIA EAAKLAKLDP AKVRPLYIEK
PLNPWKEMIR SLIDPDNDSS EAGSRTFWGG VANGPDQALV VALANARRVL GGPAIQVRCL
ECASAATPPR PADIRAARSL LAWAVR
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