| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0450 |
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| Symbol | |
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| ID | 5196829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 477314 |
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| End bp | 480139 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579989 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001260956 |
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| Protein GI | 148553374 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCCC CTGCCCCGAC GCCTGCTATC CACCCCGGCA TGTCATCCAA GCATCTCTAT
CTGGTCGACG GCTCCGGCTA TATTTTCCGG GCCTATCATC GCCTGCCGCC GCTCACCAAC
CGCCACGGAA TCCCGGCCGG GGCCGTCTAC GGCTTCACGA CGATGCTGTG GAAGCTGATC
AACGAGCTGC ACCAGGCCGA CGGACCGACT CACCTGGCGG TGATTCTCGA CGCCTCGTCG
AAGACCTTCC GCAACGAGAT GTACGACCAG TACAAGGCGC ACCGGCCGCC GCCGCCCGAA
GACCTGGTGC CGCAATTCCC GCTGATCCGC GACGCGGTGC GCGCCTTCTC GGTCCCCTGC
ATCGAGGAAT TGGGGCTCGA GGCCGACGAC ATCATCGCCT GTTATGCCGA AGCCGCGCTG
GCGCAGGACT GGCAGGTCAC GATCGTCTCG TCCGACAAGG ACCTGATGCA GCTCATCCGG
CCCGGCCTCG ACCTGCTCGA CACGATGAAC AACCGCCGCC TCGGCCGCGA GCATGTGCTG
GAGAAATTCG GCGTCGAGCC GGAGGCGCTG GGCGACGTGC TCGCGCTGAT GGGCGACAGC
GTCGACAATG TCCCCGGCGT CCCCGGCATC GGACCCAAGA CCGCGAGCCA GCTCATCCAG
CAGTTCGGCA CCCTCGACGC GGTGCTGGCC AGCACCGACC AGATCACCAA GCCCAAGCTC
AAGCAGTCGC TGATCGACCA TGCGGACAAC GCCCGGCTGT CGCGCGAGCT GGTCCGCCTG
AAATGCGATG CGCCGCTGCC CGAGCCGCTC GACGGGCTGG AATTGAAGGG CCTGCCGCCC
GAGCCGCTGC GCGCCTTCCT GGAGGACCAG GGCTTCAAGT CGCTGCTCGC CAAGGTGCAG
GGCGACGGCC CCGCCACCCT GCCGACCGGC GGCCCGACCA TGCTGGCGCT CGCGCCCGGC
GCCGAAGAGA AGCCGGCGCC CGTGATCGCG CAGGTGCCGT TCAACCATAA GGATTACGAG
ACCGTCGTCG ACGAGGCGGC GCTCGACCGC TGGATCGCCG ACGGCTTCGC CTGCGGCCGG
ATCGCGGTCG ACACCGAGAC CGACAATGTC GATCCGGTCC GCGCCAACCT GGTCGGGGTC
AGCCTGTCCA CCGCGCCGGG CAAGGCCTGC TACATCCCGC TCGCCCATAT CGGCGACGGG
CTGCTGTCGG AGACGCCCAG GCAGATCGCG ATGGACGCGG CGCTGGCGAA GCTCAAGCCC
CTGCTCGAAG CCGCGCACAT CCTCAAGATC GGCCAGAACA TCAAATATGA CATGGTCGTG
CTGGCCAAAT ACGGCGTCGA CGTCGCGCCC TATGACGACA CGATGCTGCT GTCCTACGAT
CTCGACGCCG GGCTCGGCGG CCACGGCATG GACGAATTGG CGCAGCGCCA CCTCGACCAT
GGCTGCATCG AGTTCAAGAC GGTGTGCGGC ACCGGCAAGA GCCAGATCAG CTTCGACAAG
GTGACGCTCG ACGTCGCCAC CGAATATGCC GCCGAGGACG CCGACGTCAC GCTGCGCCTG
TGGCAGCTGC TGAAGGGGCG GCTCGCGCCC GAGGCGGCGA CCCGCGTCTA TGAGCTGATC
GACCGGCCGC TGGTGCCGGT GCTGACGGGC ATGGAGCGCG CCGGCATCAA GGTCGACCGC
GAGGAACTGG CCCGGCTGTC GGCCGAGTTC TCGGGCGAGG CGACCCGGCT GGAGGCCGCG
ATCCACGCCG AGGCGGGGAC GCCGTTCACC GTCGGCAGCC CCAAGCAGCT CGGCGACATA
TTGTTCGACA AGATGGGCCT GAAGGGCGGC CGCAAGGGCA AGACCGGGGT CTATTCGACC
GACGTCACCG AACTGGAGCG GCTCGCCGGC GACGGCGTGG CGATCGCGCG GCTGGTGCTC
GACTGGCGTC AGCTCACCAA GCTGCGCTCG ACCTATACCG ACGCGCTCCA GCAGCAGATC
AATCCGGCGA CGGGCCGGGT CCACACCTGC TTCTCGATGG CGGTCGCGCA GACCGGCCGG
CTGTCCTCGA CCGATCCCAA CCTCCAGAAC ATCCCGATCC GCAGCGACCA TGGCCGCCGT
ATCCGCGACG CCTTCGTGGC CGAGCCGGGC AAGCTCATCC TGTCGGCCGA CTATTCGCAG
ATCGAGCTGC GGCTGGCGGC GCACATGGCC GACGTGCCGG CGCTGAAGGA CGCCTTCGCG
CGCGGCGACG ACATCCACGC GCTGACCGCG CAGGAGGTGT TCGGCGAGGT CAACCGCGAC
ACCCGCGCCC GCGCCAAGAC GATCAACTTC TCGATCCTCT ACGGCATCTC CGCCTGGGGC
CTCGCCGGGC GCCTGGAGGT GTCGCGCGAG GAAGCGCAGG GGATGATCGA CCGCTATTTC
TCCCGCTTCC CCGGCATCAA CCACTATATC GCCGCGACCC TCGGCCAGGT CCGCGACCAG
GGCTATGTGT CGACGCTGTT CGGCCGCAAG ACCCATCTGC CGTGGATCAG GAGCGCCAAG
CAGGGCGAGC GCCAGTCCGC CGAGCGCCAG GCGATCAACG CCCCGATCCA GGGCACCTCC
GCCGACATCA TCAAGCGCGC GATGGTGCGG ATGAACCCCG CGCTCGCCGC CGCCGGGCTG
GGCGACGTGA AGATGCTGCT CCAGGTCCAT GACGAACTGG TGTTCGAGCT GGCGCCCGAG
CAGGTCGAGC CGGCATCGGC GGTGATCCGC GCGGTGATGG CGGGCGCGGC CGAGCCGATC
GTCCGGCTGT CGGTGCCGCT GGGCGTCGAG ATCGGCACGG GGCCGAGCTG GGGCGCCGCG
CATTGA
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| Protein sequence | MFPPAPTPAI HPGMSSKHLY LVDGSGYIFR AYHRLPPLTN RHGIPAGAVY GFTTMLWKLI
NELHQADGPT HLAVILDASS KTFRNEMYDQ YKAHRPPPPE DLVPQFPLIR DAVRAFSVPC
IEELGLEADD IIACYAEAAL AQDWQVTIVS SDKDLMQLIR PGLDLLDTMN NRRLGREHVL
EKFGVEPEAL GDVLALMGDS VDNVPGVPGI GPKTASQLIQ QFGTLDAVLA STDQITKPKL
KQSLIDHADN ARLSRELVRL KCDAPLPEPL DGLELKGLPP EPLRAFLEDQ GFKSLLAKVQ
GDGPATLPTG GPTMLALAPG AEEKPAPVIA QVPFNHKDYE TVVDEAALDR WIADGFACGR
IAVDTETDNV DPVRANLVGV SLSTAPGKAC YIPLAHIGDG LLSETPRQIA MDAALAKLKP
LLEAAHILKI GQNIKYDMVV LAKYGVDVAP YDDTMLLSYD LDAGLGGHGM DELAQRHLDH
GCIEFKTVCG TGKSQISFDK VTLDVATEYA AEDADVTLRL WQLLKGRLAP EAATRVYELI
DRPLVPVLTG MERAGIKVDR EELARLSAEF SGEATRLEAA IHAEAGTPFT VGSPKQLGDI
LFDKMGLKGG RKGKTGVYST DVTELERLAG DGVAIARLVL DWRQLTKLRS TYTDALQQQI
NPATGRVHTC FSMAVAQTGR LSSTDPNLQN IPIRSDHGRR IRDAFVAEPG KLILSADYSQ
IELRLAAHMA DVPALKDAFA RGDDIHALTA QEVFGEVNRD TRARAKTINF SILYGISAWG
LAGRLEVSRE EAQGMIDRYF SRFPGINHYI AATLGQVRDQ GYVSTLFGRK THLPWIRSAK
QGERQSAERQ AINAPIQGTS ADIIKRAMVR MNPALAAAGL GDVKMLLQVH DELVFELAPE
QVEPASAVIR AVMAGAAEPI VRLSVPLGVE IGTGPSWGAA H
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