| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0440 |
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| Symbol | |
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| ID | 5197627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 467274 |
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| End bp | 467903 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579979 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001260946 |
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| Protein GI | 148553364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0337816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTTGC CGCCCAGCCG CTGCACCAAC GCGATCGCCA TCGGCACGAC GGCGATCTAC
CTGCTGCTCG TCCTGCTCGG GTGGAGCGAC GCGGCCGACA TCGCGGGCGG CTTCGTTCCC
GCGCGGCTGA CCGGCATGGA GATACCGGGG GCGCTGCCCG CCTGGATCAC GCCGCTGACC
GCGACGCTGC TCCATGGCGG CATGCTGCAC CTCGGCTTCA ACATGCTGAT GCTGGTCTTC
TGCGGACGCA TGGTCGAGGC GGTGATCGGG CCGCTGGGGC TGGCGATCCT CTACGTCGTC
GGCGCCTACG CCGCGGCGGG CATGCAGTTC CTCGTCAATC CGGCCGACGG GGCCCCGATG
ATCGGCGCGA GCGGCGCGAT CTCCGCGCTG TTCGCGGGCT ATGCGCTGCT GTTCGGCCGC
CCGCGCGGCT TCGCCAGCCA TCCGACGCTG GGCGTCGCGA TCAACACCCT GTGGCTGGCG
GCGGCCTGGA TCGGCGTCCA GTTCCTGATG GGCTTCGCCT TCGCCGACTA TGGCATGGCG
ATTGCCACCG GCGCGCATGT CGGCGGCTTC CTCGCCGGGT TGCTGCTGAT CCGCCCGCTG
CTGGCGTGGC GGCGGCGATC GCTCCCTTAG
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| Protein sequence | MRLPPSRCTN AIAIGTTAIY LLLVLLGWSD AADIAGGFVP ARLTGMEIPG ALPAWITPLT
ATLLHGGMLH LGFNMLMLVF CGRMVEAVIG PLGLAILYVV GAYAAAGMQF LVNPADGAPM
IGASGAISAL FAGYALLFGR PRGFASHPTL GVAINTLWLA AAWIGVQFLM GFAFADYGMA
IATGAHVGGF LAGLLLIRPL LAWRRRSLP
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