| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0432 |
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| Symbol | |
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| ID | 5198954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 458412 |
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| End bp | 460283 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579971 |
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| Product | DNA primase |
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| Protein accession | YP_001260938 |
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| Protein GI | 148553356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.401206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCT CCCCCCAATT CCTCGACGAG CTCCGCGCCC GGGTCACGCT GTCCACGCTG
ATCGGGCGGT CGGTGAAGCT CGTGAAGGCG GGACGCGAGT TCAAGGCGTG CTGCCCGTTC
CACAACGAGA AGTCGCCGAG CTTCTACGTC AACGACGACA AGGGCTTCTA CCATTGCTTC
GGCTGCGGCG CGCATGGCGA CGCGATCCGC TTCCTGACCG AGGCGAAGGG CCTGACCTTC
ATCGATGCGG TCAAGGAACT GGCGCAGGGC GCCGGGATGG AGGTCCCCGC CCCCGATCCG
CGCGCGGCGC AGCGCAACGA GATGCAGGCC GGGCTCCATG ACGTCATGGC GGCAGCGGCA
AGCTGGTTCC AGGAACAGCT GGGCGGGATA GCCGGCGCCG AGGCTCGCGC CTATCTCCAG
CGGCGCGGGA TCGACGAACG GCTGGTGAAG AAATTCGGCA TCGGCTTCGC CCCCGATTCG
CGCGGCAAGC TCCGAACCGC GCTGAAGAGC TTCGGCGACG CCAAGCTGAT CGAGACCGGG
TTGCTGATCC TGGTCGAGGA CAAGGAACCC TATGACCGGT TCCGGGGGCG CGTGATGATC
CCGATCCAGG ACCAGCGCGG GCGCGTCATC GCCTTTGGCG GGCGCATCCT CGACAAGGGC
GAGCCCAAAT ATCTGAACTC GCCCGACACG CCGCTGTTCG ACAAAGGCCG GACCCTGTTC
AACATCGAGC GCGCCAGCGC CGCGTCGCGC AAGGCCAACC GCGTGATCGC GGTCGAAGGC
TATATGGACG TGATCGCACT GGCCAAGGCG GGGATCGACG AAGCCGTCGC CGCCAACGGC
ACCGCGCTGA CCGAAGCGCA GCTCGAACGG ATGTGGCGGA TGACCGAGAT ACCGCTGCTC
TGCTTCGACG GCGACAAGGC AGGACAGAAG GCCGCCGTCC GCGCCGCGCA GCGCGCGCTG
CCGATGATCG CGCCGGGGCG GACGCTGCGC TTCGCCCTGC TGCCCGGCGG GCAGGACCCC
GACGACCTCG TCAAGTCCGG CGGCGTCCGC GCGGTCGAGC AGGTGCTGGA CGAGGCGATC
AGCCTCGACG AACTGCTGTG GCGCGCCGAA TATGAGGCGC AGCCGCTGTC GACGCCCGAG
GCGCGGGCCG GCCTGCGCAA GCGGCTCGGC GACCTCGCGG GATCGATCCA GGACCGCGAC
GTGCGCGAAC TCTACCAGGC GGAGTTCCGC CGCCGCTTCG ACGAGCTGTT CGGCAGCGCC
CAGCGCCGTC CGTTCGAACG GAACTTCCAG CCCTTCCAGC CCCGCCAGCA GCGCCGCCCC
GGCCAGCCCT GGAAACCCGA GCCGCTGCCG CCCTCGCGCG CCGCCCATGC GGTGAACAAG
AGCGGGGTCA ATCCGATGGT GACCCGCGCG GTGATGGCGG GTCTGCTCCG CTTCCCGGCG
CTTTTCTCGT CGCACATGGA GGCGATCGGA CAGCTCCAGC TCGGCGACGA GCGGCTCGAT
CGGCTGCGCG CGGAGGCCTT CGAAGCCGGA TTTTCCGGGG GACCGCTTGA AAAGGAAGGC
CTCGAAACCA TATTGGCCGA GGCGGGTCTT GGGGCTGTGG TCGAGGAGCT CAAGGCTACG
AACGCTCTTG CCTTTTCCTT CTTGCGCGGC AATGCCGATC CTGACCGTGC TATGCGCGAT
CTCTCGGCGG CGATCGAGGC CATGGCGGCG CGTCCCCTAT TGGATGCGGC GCTGCGGGAG
GCCACCGAGC GGTTGGGCAT GGCGGCCGAC GATGCCGGGC TAGAGGAGCA GCGCAGGCTG
CTCGCGGCCC GCGAGGCGGC GGATCGCGCG CTCACCGACC TCGCCCTGGG CGAGGACGGC
GGGGGCGCTT AA
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| Protein sequence | MSLSPQFLDE LRARVTLSTL IGRSVKLVKA GREFKACCPF HNEKSPSFYV NDDKGFYHCF
GCGAHGDAIR FLTEAKGLTF IDAVKELAQG AGMEVPAPDP RAAQRNEMQA GLHDVMAAAA
SWFQEQLGGI AGAEARAYLQ RRGIDERLVK KFGIGFAPDS RGKLRTALKS FGDAKLIETG
LLILVEDKEP YDRFRGRVMI PIQDQRGRVI AFGGRILDKG EPKYLNSPDT PLFDKGRTLF
NIERASAASR KANRVIAVEG YMDVIALAKA GIDEAVAANG TALTEAQLER MWRMTEIPLL
CFDGDKAGQK AAVRAAQRAL PMIAPGRTLR FALLPGGQDP DDLVKSGGVR AVEQVLDEAI
SLDELLWRAE YEAQPLSTPE ARAGLRKRLG DLAGSIQDRD VRELYQAEFR RRFDELFGSA
QRRPFERNFQ PFQPRQQRRP GQPWKPEPLP PSRAAHAVNK SGVNPMVTRA VMAGLLRFPA
LFSSHMEAIG QLQLGDERLD RLRAEAFEAG FSGGPLEKEG LETILAEAGL GAVVEELKAT
NALAFSFLRG NADPDRAMRD LSAAIEAMAA RPLLDAALRE ATERLGMAAD DAGLEEQRRL
LAAREAADRA LTDLALGEDG GGA
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