Gene Swit_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0343 
Symbol 
ID5197578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp365290 
End bp365649 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content69% 
IMG OID640579883 
Producthypothetical protein 
Protein accessionYP_001260852 
Protein GI148553270 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.619973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC CCGAAGCGGA GTGGCGCGCG CATCTGGCCG AGGGGCGCTT CATGATCCAG 
CGCAGCCGGT CGACCGGCGG CCATGTCTTC TATCCGCGCA TCGTCGAACC CGGCACCGGC
GCCGACGACC TGCAATGGGT GGAGGCGTCG GGCAAGGGCG TGGTCCACGC CGTCACGGTG
GTCCGCAAGA AGGACCCGGC GGACAGCTAC AATGTCGTGC TGGTCGACCT GGCCGAGGGG
CCCCGGCTGA TGAGCCGGGT CGACGGGATC GATGTCGACG CGGTCCGGAT CGGCATGGAC
GTGCGGGCCC GCATCGTCGA GGGGGAAGGC AAGCCGCTGC TCGTCTTCGT GCCGGCATGA
 
Protein sequence
MIQPEAEWRA HLAEGRFMIQ RSRSTGGHVF YPRIVEPGTG ADDLQWVEAS GKGVVHAVTV 
VRKKDPADSY NVVLVDLAEG PRLMSRVDGI DVDAVRIGMD VRARIVEGEG KPLLVFVPA