| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0302 |
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| Symbol | |
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| ID | 5199113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 318450 |
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| End bp | 320837 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579842 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260811 |
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| Protein GI | 148553229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.122608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGTC GCACCATTTT TCTGTCGGGA TGCGCTTTCG CGCTGAACGC GCTGCCGAGC
ATGGGCATGG CCCAGACCGC CGTTCCGCCG CAGGCGGCCG AAGCCGCTGA CGTCGCCGCC
GGCGACATCG TCGTCACCGC CCGTCGCCGT GAGGAATCGA TCCAGGACGT GCCGATCTCG
GTCTCGGCCC TGTCGGGCGA GCAGCTCCGC CGCCAGGGCG TCACCGACGC CCAGTCGCTG
CAATATGCGA CGCCGTCGCT GTCGATCACC AGCGCGCAGA GCCAGCGCAA TACCGTGGCC
TTCGCGCTGC GCGGCCAGCG CACGCAGGAG ACCCAGCTCT TCACCGATCC GCCGGTCGGC
ACCTATTTCG CCGAAGTCGT CCAGCCGCGC CCCTATGGCT TCGGCAAGAC CTTCTTCGAC
CTCCAGTCGG TCCAGGTGCT CAAGGGCGTC CAGGGCACGC TGTTCGGCCG CAACATGACC
GGCGGCGCCG TGCTCGTCGA GCCGGCCCAT CCCGAACTCG GCTCGTTCAG CGGCGAGGTC
CGCGGCCAGT ACGGCAATTA CGACATGAAG GACCTCTACG GGATGGTGAA CATCCCGGTC
GGCGACAATT TCGCGATCCG CGTCGCCGGC AAGACCCGCA AGCGCGACGG CTGGGCCCAT
GAGGTGACCA CCGGCCGCGA TTACGACAAC CAGGATTTCA ACACCTTCCG CGTCTCCACG
CTGTGGAAGC CGATCGAGGG GCTGGAGACG CTGACCGTCG GCGACTGGTA CAAGTCGAAG
GAGCACGGCA CCGCCGCGTT CATCACCGAC CTGCGCCTGC CGTCGGTCAT CTCCAACTAT
GAAGGGCTGC GCGCGGCAGG CCTGATCACC GCCAACATCC CGGCGCAATA TGCCGCCGCC
CGCGACATGT TCTACAAGAA GCACTTCACC CTCGACATGG GTGCGGGCGA GGGCGGCAAT
CTCGACGTCT TCGGCAAGCC CTACGAGAAC ATCAAGAACT GGGGCATCAC CAACAAGACG
ACCTGGGAGC TGAGCGACAC GATCACGCTG AAGAACATCT TCGGCTATCG CCGCCTCCAG
CGCGACCAGG TGCAGGATTA TGACGGCATT CCCGCCTTCC TGATCACGCC TTATCAATAT
GCTCGCAGCC GCAACATCAG CGAGGAGTTC CAGATCCAGG GCAAGGCCTT CGACCGGAAG
CTCGATTATA TCGCCGGCCT CTATTATTTC GAGGAGAAGG GCAAGGACGG CTCGCTGGCC
AACACGCTGC CCGAGCTCAA CATCGTCGGC GCCGGCCAGA ACCCGCGCAC CGCGTCCGCG
ACCCAGTTCG TCACCGCCAA CCCCGGCGTC GGCTATTCGC GGACGGCTGC GGCCTTCCTG
GCCGGCACGT TCCACGCGAC CGATCAGCTC AGCCTGTCGG GCGGCCTCCG CTACAATTAC
GACAAGCGCA AGATCACCGT TTCGCCGTCG CTGCCGTTCC GGACCAATCC GGCCGGCGGC
ACGGGCGTCT GCTCGTTCGA TATCGACGCG GCGACCGCCG GCACCCAGAC GGTGCCGTTC
GACCAGTGCT CGTTCACCAA CCAGAAGTCG TTCAAGGAAT GGACCTACGA CGCGACCGTC
CAATATGAGC CGTCGGCGAA CGTCACCGCC TACGCCTCCT ACCGGCACGG CTTCCGCGCC
GGCGGCTTCT CGACCCGCGC GACCAGCTAC GTCACCCTCG CGCCGTTCCT GCCCGAGTTC
GTCGACGAAT ATGAGATCGG CCTGAAGACC AGCACGCGGA TCGGCTCGTC GGGCCGCCTG
ACGACCAGCA CGGCGATCTT CCGGCAGGAC GGCTCGGACG TGCAGAAGCA GCGCGCGACC
TTCGTCAACG GCAACGTCTT CACGGTCATC GACAACACCG CCAAGCAGCG CAACAGCGGC
GGCGAGTTCG AGGCGACGCT GAGCGTGCCG AACTTCTCGC TGACCGGCTT CTACTCCTAC
ACCAAGGTGA AGATCCTGCG CGGCGCGGCG GTATCGGCGA TCGGGCCGGA GATCGCGCAG
CGCGGCACGC CGAAGAACCA GGCGGGCTTC ACGGCGACCG TCTCGCCGCC GATCTCGGAG
GATGTCGGCC AGCTCAACCT GATCGGCAAC TTCACCTGGC GCAGCAAGAA CTATCTCGAC
GATTTCGAGG TGAGCGGCGT CCAGCCGGCC TTCGCGCTGG TCAACCTGCG CGCCGAACTC
AACGACATCG GCGGATCGAA GGCCTCGATC GCGTTCTTCG TCAACAACGC GACCAACGAG
GTCTACCGCA TCGGCGTCCT CGGCCTGGTC GCCGAAGGCC TCGGCTTCTC GTCGAGCGTC
TATGGCGAGC CGCGGATGTA TGGCGTCGAG CTGGGCTACA AATTCTAA
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| Protein sequence | MRCRTIFLSG CAFALNALPS MGMAQTAVPP QAAEAADVAA GDIVVTARRR EESIQDVPIS
VSALSGEQLR RQGVTDAQSL QYATPSLSIT SAQSQRNTVA FALRGQRTQE TQLFTDPPVG
TYFAEVVQPR PYGFGKTFFD LQSVQVLKGV QGTLFGRNMT GGAVLVEPAH PELGSFSGEV
RGQYGNYDMK DLYGMVNIPV GDNFAIRVAG KTRKRDGWAH EVTTGRDYDN QDFNTFRVST
LWKPIEGLET LTVGDWYKSK EHGTAAFITD LRLPSVISNY EGLRAAGLIT ANIPAQYAAA
RDMFYKKHFT LDMGAGEGGN LDVFGKPYEN IKNWGITNKT TWELSDTITL KNIFGYRRLQ
RDQVQDYDGI PAFLITPYQY ARSRNISEEF QIQGKAFDRK LDYIAGLYYF EEKGKDGSLA
NTLPELNIVG AGQNPRTASA TQFVTANPGV GYSRTAAAFL AGTFHATDQL SLSGGLRYNY
DKRKITVSPS LPFRTNPAGG TGVCSFDIDA ATAGTQTVPF DQCSFTNQKS FKEWTYDATV
QYEPSANVTA YASYRHGFRA GGFSTRATSY VTLAPFLPEF VDEYEIGLKT STRIGSSGRL
TTSTAIFRQD GSDVQKQRAT FVNGNVFTVI DNTAKQRNSG GEFEATLSVP NFSLTGFYSY
TKVKILRGAA VSAIGPEIAQ RGTPKNQAGF TATVSPPISE DVGQLNLIGN FTWRSKNYLD
DFEVSGVQPA FALVNLRAEL NDIGGSKASI AFFVNNATNE VYRIGVLGLV AEGLGFSSSV
YGEPRMYGVE LGYKF
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