Gene Swit_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0269 
Symbol 
ID5196340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp282571 
End bp284085 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content65% 
IMG OID640579809 
Productcatalase 
Protein accessionYP_001260778 
Protein GI148553196 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0753] Catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.146052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.35045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA ATCCGCAGAA TGCCGGCAAG TGCCCGGTGA CCCATCTGAC GACGGCCTTC 
GGCGCGCCCG TGGTCGACAA CCAGAACAGC CTGACCGCCG GCCCGCGCGG GCCGCTGCTG
ATGCAGGACG TCTGGCTGCT CGAGAAGCTC GCCAACCTCA ACCGCGAGGT CATTCCCGAG
CGGCGCATGC ACGCCAAGGG GTCGGGCGCG TTCGGCACCT TCACCGTCAC CCATGACATC
AGCCGCTACA CCCGCGCCGA CATCTTCTCG CAGGTCGGCA AGAAGACCGA GATGTTCGCC
CGCTTCACCA CCGTCGCCGG CGAGCGCGGC GCGGCCGACG CCGAGCGCGA CATCCGCGGC
TTCGCGCTGA AATTCTACAC CGAGGAGGGC AATTGGGACC TGGTCGGCAA CAACACGCCG
GTCTTCTTCC TGCGCGACTC CCGCAAATTC CCCGATCTCA ACAAGGCGGT GAAGCGCGAT
CCGCGCACCA ACATGCGCTC CGCCACCAAC AACTGGGATT TCTGGACGCT GCTGCCCGAG
GCGCTGCACC AGGTGACGAT CGTGATGTCG GACCGCGGCA TCCCGAAGAG CTACCGCCAC
ATGCACGGCT TCGGATCGCA CACCTACAGC TTCTACAACG ACGCGGGCGA GCGTTTCTGG
GTGAAGTTCC ACTTCCGGAC GCAGCAGGGC ATCGACAACC TGACCGACGC CGAGGCGGCG
GCCGTCGTCG CCGGCGACCG CGAGAGCAAC CAGCGCGACC TCTACGAGGC GATCGAGCGC
GGCGATTTCC CGAAATGGAC GATGTTCATC CAGGTGATGC CGGAGAAGGA CGCCGAGACC
TATCACGTCC ACCCGTTCGA CCTCACCAAG GTCTGGTACA AGTCGGACTA TCCGCTGATC
GAGGTCGGCG AGTTCGAGCT CAACCGCAAC CCGGAGAATT TCTTCCAGGA CGTCGAGCAG
AGCGCCTTCG CGCCGTCGAA CCTGGTGCCC GGCATCGGCG TGTCGCCCGA CAAGATGCTC
CAGTCGCGGC TGTTCGCCTA TGCCGACGCG CAGCGCTACC GGCTCGGCGT CAACTATCAC
CAAATTCCGG TCAACGCTGC GCGCTGCCCG GTGTTCAGCA ACCATCGCGA CGGCCAGGGC
CGGACCGACG GCAATTATGG CGGCCTGCCG CATTATCAGC CGAACAGCTT CGGCCAGTGG
GTCGACCAGC CCGATTTCCG GGAGCCGCCG CTGAAGATCG ACGGCAATGC CGACTTCTGG
AACTTCCGCG AGGATGACGA CGATTATTTC ACCCAGCCGC GCAAGCTGTT CCAGTTGATG
ACGCCCGCCC AGCAACAGGT GCTGTTCGAC AACACCGCCC GCGCGATGGG CGATGCGCCG
GACTTCATCA AGCAGCGGCA CATCGACAAC TGCACCCGCT GCGACCCGGC CTATGGCGCC
GGTGTCGCGA AGGCGCTGGG GATGTCGGCG AAGGCGCCCG GCGACCTGCC GGCCACGCCC
GAACTGGCCG ACTGA
 
Protein sequence
MSDNPQNAGK CPVTHLTTAF GAPVVDNQNS LTAGPRGPLL MQDVWLLEKL ANLNREVIPE 
RRMHAKGSGA FGTFTVTHDI SRYTRADIFS QVGKKTEMFA RFTTVAGERG AADAERDIRG
FALKFYTEEG NWDLVGNNTP VFFLRDSRKF PDLNKAVKRD PRTNMRSATN NWDFWTLLPE
ALHQVTIVMS DRGIPKSYRH MHGFGSHTYS FYNDAGERFW VKFHFRTQQG IDNLTDAEAA
AVVAGDRESN QRDLYEAIER GDFPKWTMFI QVMPEKDAET YHVHPFDLTK VWYKSDYPLI
EVGEFELNRN PENFFQDVEQ SAFAPSNLVP GIGVSPDKML QSRLFAYADA QRYRLGVNYH
QIPVNAARCP VFSNHRDGQG RTDGNYGGLP HYQPNSFGQW VDQPDFREPP LKIDGNADFW
NFREDDDDYF TQPRKLFQLM TPAQQQVLFD NTARAMGDAP DFIKQRHIDN CTRCDPAYGA
GVAKALGMSA KAPGDLPATP ELAD