| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0262 |
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| Symbol | |
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| ID | 5197392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 270347 |
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| End bp | 272170 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579802 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001260771 |
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| Protein GI | 148553189 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.263497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0373567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC GCAACGTGGC CATCATCGCC CACGTCGATC ACGGCAAGAC CACGCTCGTC
GACCAGCTTT TCCGGCAGTC GGGCACTTTC CGCGACAACC AGCGCGTCGA AGAACGCGCG
ATGGATTCGA ACGACCTCGA AAAGGAACGC GGGATCACCA TCCTGGCCAA GTGCACCTCG
GTCGAATGGG AAGGGACCCG CATCAACATC GTCGACACGC CCGGCCACGC CGACTTCGGC
GGCGAGGTGG AGCGCATCCT GTCGATGGTC GACGGCGTCA TCCTGCTGGT CGACTCCTCC
GAAGGCGCGA TGCCGCAGAC CAAGTTCGTG ACCGGCAAGG CGCTGGCGCT GGGGCTGCGC
CCGATCGTCG TGGTCAACAA GATCGACCGG CCGGACGAGC GCACCCAGGA GGTGCTCGAC
GAGGTGTTCG ACCTGTTCGT CTCATTGGAC GCGACCGACG AGCAGCTCGA CTTCCCGGTC
CTGTTCGCCA GCGGCCGCAA CGGCTATGCC AATGAGGACC CGTCGGCGCG CTCGGGCACG
CTGAAGCCGC TGTTCCAGAA GATCGTCGAC CATGTGCCGG CGCCGAAGGC CGATCCCAAC
GGCCCGTTCA AATTCCTGGT GACGCTGCTC GACCGCGACA ATTTCGTCGG CCGCATCCTC
ACCGGCCTGG TCCAGAGCGG CACCGTCAAG ATCAACTCGC CGGTCCACGC GCTCGATCCC
GAGGGCAATG TCGTCGAGAC CGGCCGCGCG TCGAAGATCA TGGCGTTCCG GGGCCTCGAG
CGGGTTCCCG TCGACGAGGC GAAGGCCGGC GACATCATCT CGATCGCGGG CCTGACCGTC
GCGACCGTCG CCAACACCAT CGCCGATCCG AGCGTCACCG AGCCGCTGCA CGCGCAGCCG
ATCGATCCGC CGACGCTGTC GATGCGCTTC GCCGTCAACG ACAGCCCGAT GGCCGGCCGC
GAAGGCAGCA AGGTGACGAG CCGGATGATT CGCGACCGTC TGTTCCGCGA GGCGGAATCG
AACGTCGCGA TCAAGGTGAC CGAGAGCGAC GACAAGGACA GCTTCGAGGT CGCCGGCCGC
GGCGAGCTCC AGCTCGGCGT GCTGATCGAG ACGATGCGCC GCGAGGGCTT CGAGCTCGGC
ATCAGCCGCC CGCGCGTGCT GTTCCGCGAG AATGAGCAGG GCGGCCGCGA GGAGCCCTAT
GAGACCGTCG TGATCGACGT CGACGACGAT TATTCGGGCA CGGTCGTCGA CAAGATGGCG
CAGCGCAAGG CCGAGATGAC CGACATGCGC CCGTCGGGCG GCGGCAAGAC CCGCATCACC
TTCTCGGCGC CGTCGCGCGG CCTGATCGGC TATCATGGCG AGTTCCTGTC CGACACGCGC
GGCACCGGCA TCATGAACCG GCTGTTCGAG AAATACGGCC CCCACAAGGG CAATATCGAA
GGCCGCAAGA ACGGCGTGCT GATCTCCAAC GGCGCGGGCG AGGCGAACAG CTATGCGCTC
GGCCCGCTCG AGGATCGCGG CATCCTGTTC GTCGGCCATG GCGAGGCGCT CTACGAGGGC
ATGATCGTCG GCGAGAACGC CAAGACCGAC GATCTCGAAG TCAACCCGAT GAAGGCGAAG
CAGCTCACCA ACTTCCGCGC CTCGGGCGGC AAGGACGACG CGATCCGCCT GACCCCGCCG
AAGCGGATGA CGCTGGAGCA GGCGATCGCC TATATCGACG ACGACGAGCT CGTCGAGGTG
ACGCCGAAGT CGATCCGGCT GCGCAAGCGC CACCTCGACC CCCACGAGCG CAAGCGCGCG
AGCCGGGCCA AGGCGGCGGC TTGA
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| Protein sequence | MSLRNVAIIA HVDHGKTTLV DQLFRQSGTF RDNQRVEERA MDSNDLEKER GITILAKCTS
VEWEGTRINI VDTPGHADFG GEVERILSMV DGVILLVDSS EGAMPQTKFV TGKALALGLR
PIVVVNKIDR PDERTQEVLD EVFDLFVSLD ATDEQLDFPV LFASGRNGYA NEDPSARSGT
LKPLFQKIVD HVPAPKADPN GPFKFLVTLL DRDNFVGRIL TGLVQSGTVK INSPVHALDP
EGNVVETGRA SKIMAFRGLE RVPVDEAKAG DIISIAGLTV ATVANTIADP SVTEPLHAQP
IDPPTLSMRF AVNDSPMAGR EGSKVTSRMI RDRLFREAES NVAIKVTESD DKDSFEVAGR
GELQLGVLIE TMRREGFELG ISRPRVLFRE NEQGGREEPY ETVVIDVDDD YSGTVVDKMA
QRKAEMTDMR PSGGGKTRIT FSAPSRGLIG YHGEFLSDTR GTGIMNRLFE KYGPHKGNIE
GRKNGVLISN GAGEANSYAL GPLEDRGILF VGHGEALYEG MIVGENAKTD DLEVNPMKAK
QLTNFRASGG KDDAIRLTPP KRMTLEQAIA YIDDDELVEV TPKSIRLRKR HLDPHERKRA
SRAKAAA
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