| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0250 |
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| Symbol | |
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| ID | 5196739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 257528 |
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| End bp | 258916 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579790 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001260759 |
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| Protein GI | 148553177 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0876875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0815584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCG AAATCCTGAT TGTCGACGAC GAGGCGGATA TCCGCGACCT GGTGGCGGGC
GTGCTGGAGG ATGAGGGCTA TGCCGCCCGC ACCGCCGCCG ACAGCGACTC GGCGCTCGCG
GCGATCGACG AGCGGCGGCC GTCGCTCGTG CTGCTCGACG TCTGGCTGCA GGGATCGCGC
CTCGACGGGC TCGACCTGCT CGACGAGATC AAGCGCCGCG ACCCGAGCCT GCCGGTGTTG
ATGATCTCGG GCCACGGCAA TCTCGACACC GCGGTGACGG CGATCCGCCG CGGCGCGACC
GACTTCATCG AGAAGCCGTT CGAGGCCGAG CATCTGCTGC TGCTGGTCGA CCGCGCGACC
GAGACCGACC GGCTGCGCCG CGAGAATGCG ACGCTCAAGG CGCAGATTGG CCAGGAGGAG
GAGCTCACCG GCAATTCGGG CGCGATCAAC GGCATCCGCG CCACGCTGAA GCGCGTCGCC
GCGACCGGCA GCCGCGTGCT GATCAGCGGC CCGGCCGGCG TCGGCAAGGA GGTGGCGGCG
CGCCTCCTCC ATGTCTGGAG CCACCGCGCG CAGGCGCCCT TCATCGTCGT CAGCGCGGCG
CGGATGGAGC CCGAGCGGGT CGAGGAGGAG TTGTTCGGGG TCGAGGAGAA TGGCGAGCTG
CTTCGCCCCG GCCTGCTCGA ACAGGCGCAT GGCGGCACGT TGTTCCTCGA CGAGATCGCC
GACATGCCGC TCACCACCCA GGCGAAGATA TTGCGGGTGC TGACCGAACA GGCGTTCAAC
CGGGTCGGCG GGCAGCGCAT CGTCAAGGTC GACGTCCGCG TCGTCTCGGC CACCTCGCGC
AACCTGGCCG AGGAGATCAC CGCCGGGCGT TTCCGCGAGG ACCTCTATTA TCGACTCAAC
GTCGTGCCGG TGAACATCCC GCCGCTGGCC GAACGGCGCG AGGACATCCC GGCGCTGGTC
GAACATTTCC TGGCGCGCTT TGCTTCCGAG CGACGGGTGC CGACTCCGGT CGTCACCGAC
GATGCCGTGG GCGCGCTGCA AACCTATGAC TGGCCGGGCA ATGTCCGTCA GCTCCGCAAT
ATCGTCGAGC GGACGATCAT CCTCGCCCCG GGCGAGCGGA TCGGCCAGAT CGAACTCGAC
ATGCTCCCGC CCGAGATATT GAGCGACCAG GCGCGGCTCG CGCCGGGCGA GGCGGCCCGA
TCGATCATGG GGACGCCGCT GCGCGAGGCG CGCGAGACGT TCGAGCGCGA ATATCTGCGC
GTCCAGATCC GCCGTTTCTC GGGCAATATC TCGAAGACGG CCTCGTTCAT CGGCATGGAG
CGCTCGGCGC TCCACCGCAA GCTCAAGACG CTCGGGCTGG TCGACCCGCG GGAGGAGGGG
GAGGAGTAA
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| Protein sequence | MALEILIVDD EADIRDLVAG VLEDEGYAAR TAADSDSALA AIDERRPSLV LLDVWLQGSR
LDGLDLLDEI KRRDPSLPVL MISGHGNLDT AVTAIRRGAT DFIEKPFEAE HLLLLVDRAT
ETDRLRRENA TLKAQIGQEE ELTGNSGAIN GIRATLKRVA ATGSRVLISG PAGVGKEVAA
RLLHVWSHRA QAPFIVVSAA RMEPERVEEE LFGVEENGEL LRPGLLEQAH GGTLFLDEIA
DMPLTTQAKI LRVLTEQAFN RVGGQRIVKV DVRVVSATSR NLAEEITAGR FREDLYYRLN
VVPVNIPPLA ERREDIPALV EHFLARFASE RRVPTPVVTD DAVGALQTYD WPGNVRQLRN
IVERTIILAP GERIGQIELD MLPPEILSDQ ARLAPGEAAR SIMGTPLREA RETFEREYLR
VQIRRFSGNI SKTASFIGME RSALHRKLKT LGLVDPREEG EE
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