Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0161 |
Symbol | |
ID | 5199106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 154172 |
End bp | 155143 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579700 |
Product | P-type conjugative transfer ATPase TrbB |
Protein accession | YP_001260670 |
Protein GI | 148553088 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.654674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGC CCTCTGCCAT CGTCCATGCG CGCAGCACTT CGATGCTGCG CAGCGCGCTC GGGCCGGCGA TCGCCGCCTG GCTCGACGAC AATGGCGTCG CCGAGGTCAT GCTCAACGCC GACGGCCGGT TGTGGGTCGA CCGGCTCGAC AGCGGCATGG CCGAGACCGG CGAGCGCCTG ACCGCGGCAC AGGCCGAGCG CATCATCCGC CTTGTCGCCC ATCACGTCGG GGCGGAGGTC CACCGCGCAA CGCCCCGCGT GTCAGCCGAG CTGCCCGAGA GCGGCGAGCG CTTCGAAGGC CTGCTGCCGC CTGTGGTCGC GGCACCCGTC TTCTCGATCC GGCGGCCGGC GAGTTTGCCG CTGGCGCTCG CCGACTATGT CGCCGCCGGT ACCATGACCG CGACGGCCGC CGCCTTCCTG GCCGGGGCAG TCAAGGATCG CGCCAATATT CTCGTCGCGG GCGGCACATC GACCGGCAAG ACGACGCTCA CCAATGCGCT GCTCGCGGTC GCGTCCGACA GCGACGACCG CATCATCCTG ATAGAGGATA CCCGCGAGCT GCGCTGCGAC GCGGCTAATG TCCTGGCGCT GCGCACTGCG CCGGGGGTCA CGATGACCGA CCTGGTACGC TCCAGCCTGC GCCTGCGGCC CGATCGCATT CCGGTCGGCG AAGTGCGAGG CCCGGAAGCG CTCGACCTGC TCAAAGCCTG GGGCACCGGC CATCCCGGCG GGATCGGTAC GATTCACGCC GGCACCGCGA CCTCCGCGCT CCACCGGCTC GAACAGCTCA TCCTCGAAGC CATCGCGCAC GTCCCGCGCC CCCTGATCGC CGAGACGATC GACGTCATCG CGGTGCTCAG CGGTCGCGGC ACCGAGCGCC GCCTGTCCGA GCTGGTCCGT GTCGAAGGGC TCGATGCGGC CGGCGCCTAC TGCCTCCGCA ACATCCATAC AGCACAGGGA GTCACCGCAT GA
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Protein sequence | MTQPSAIVHA RSTSMLRSAL GPAIAAWLDD NGVAEVMLNA DGRLWVDRLD SGMAETGERL TAAQAERIIR LVAHHVGAEV HRATPRVSAE LPESGERFEG LLPPVVAAPV FSIRRPASLP LALADYVAAG TMTATAAAFL AGAVKDRANI LVAGGTSTGK TTLTNALLAV ASDSDDRIIL IEDTRELRCD AANVLALRTA PGVTMTDLVR SSLRLRPDRI PVGEVRGPEA LDLLKAWGTG HPGGIGTIHA GTATSALHRL EQLILEAIAH VPRPLIAETI DVIAVLSGRG TERRLSELVR VEGLDAAGAY CLRNIHTAQG VTA
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