Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0141 |
Symbol | |
ID | 5196860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 136546 |
End bp | 137952 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579680 |
Product | hypothetical protein |
Protein accession | YP_001260650 |
Protein GI | 148553068 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0813471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCGTT CCCGAACCCT GCCGATCGCC CTGCTCGCGG GCGCCATCCT TCCCCTCGCC GCCCAGCCCG TTCATGGCGC CGCGCCGACC CCGGTCGATC CCGCGCAGCA CGGCCAGATG CTCGACATCT GGAAGAAGAT GATCGCGATC CCGACCGTCC ATGGCCGGGG CCAGACCCGG GCGATGGCCG ACTATATCGC CGGCCTGCTC AAGCAGGGCG GCTTCGCGGC CGAGGATATC GTGATCGAGG GCGACGGCGA CGACATCTCG CTCGCCGCCC GCTATCGCGG CACCGGCAAG GGCAAGCCGA TCCTGCTGTC GGGCCACATG GACGTGGTCG AGGCGCGGCC GTCCGACTGG ACCCGCGATC CCTTCGTCCC GGTCGAGGAG AACGGCTTCG TCTACGGGCG CGGGGCGCTC GACATGAAGT TCGGCGACGC GGTGCTGGTC TCCACCCTGC TCAAGCTCAA GGCCGAGGGG TTCAAGCCGT CGCGCGACAT CCTGCTGCTG CTGTCGGGCG ACGAGGAGAC CGCGATGGCG ACGACCGCGC GGCTGGCCGA ACGCTATGGC GGCGATGCCG AGCTGCTGCT CAACGCCGAC GGCGGCGGCG GCATGCTCGA CGACCAGGGC AAGCCGGTCG CCTTCTACGT CCAGGGCGGC GAGAAGACCT ATGCCGACAT CGAGATCAGC GTGACCGACC CCGGCGGCCA TTCGAGCCGG CCGGGCGCCA CCAATGCGAT CGCCACCCTC GCCCAGGCGA TCGACCGCAT CGCCGCCTAT AAATTCCCCG CCCAGGTCAA CGAGATCACC CGCGCCTATT TCAAGGCGAC CGGCAAGCAG GTCGGCGGCA CGATCGGCGC GGCGATGCTG CGCTTCGCCG ACGATCCCAA CGACGCGGCG GCGGTCGCGA CGCTGCGCGC CGAGCCCGAA TATGTCGGCA TCACCGGCAC GACCTGCGTG CCCACCATGC TGTCGGGCGG CCATGCGCTC AACGCGCTGC CCCAGAAGGC GACGGTGTCG GTCAACTGCC GCATCTTCCC CGGCGTCCCG ATCGACAGCG TCCGCGACAC GCTGGCCAAG GTGATCGACA ATCCCAAGGC GACGGTCACC ATCCTCGACC ATCCGCTGGG CAGCGACGCC TCGCCGCTCC GCCCCGACCT GATGAAGGCG GTGCGCAAGG GGATCGACCA GAGCTTCCCC GGCCTGCCGA TCGTGCCGCA GATGGCGGCG GGCGCCACCG ACAGCCTCTA TTTCCGCGCG AAGGGCGTGC CGAGCTACGG CGTGCTCGGC ATGTTCCTCA ACCCCGCCGA CGACTTCTCG CACGGCCTGA ACGAGCGCGC GCCGGTGGCG AGCATCGATC CGGCGCTGCG GCTGATGCGG ACGCTGATCG TCGACCTGTC GAAATAG
|
Protein sequence | MRRSRTLPIA LLAGAILPLA AQPVHGAAPT PVDPAQHGQM LDIWKKMIAI PTVHGRGQTR AMADYIAGLL KQGGFAAEDI VIEGDGDDIS LAARYRGTGK GKPILLSGHM DVVEARPSDW TRDPFVPVEE NGFVYGRGAL DMKFGDAVLV STLLKLKAEG FKPSRDILLL LSGDEETAMA TTARLAERYG GDAELLLNAD GGGGMLDDQG KPVAFYVQGG EKTYADIEIS VTDPGGHSSR PGATNAIATL AQAIDRIAAY KFPAQVNEIT RAYFKATGKQ VGGTIGAAML RFADDPNDAA AVATLRAEPE YVGITGTTCV PTMLSGGHAL NALPQKATVS VNCRIFPGVP IDSVRDTLAK VIDNPKATVT ILDHPLGSDA SPLRPDLMKA VRKGIDQSFP GLPIVPQMAA GATDSLYFRA KGVPSYGVLG MFLNPADDFS HGLNERAPVA SIDPALRLMR TLIVDLSK
|
| |