Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0094 |
Symbol | |
ID | 5200493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 88912 |
End bp | 89811 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640579633 |
Product | hypothetical protein |
Protein accession | YP_001260604 |
Protein GI | 148553022 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.73224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA GTCTCTCCAC CCGTCCGCGC TTCGACGTCC AGCTCGCCGC CGCCTATGCC GCGCTGATCG GGTCGATCAC CGCCTTCTGC GTCGGCACCT CCTTCGCCAA GCGGCTCTTC CCGCTCGTCG GCGCGGAGGC GACCAGCGCC TATCGCGTCG GCTTCGCCGC GCTGATCCTG CTGACCGTCT GGCGGCCCTG GCGCGGACGG ATCACTCGCG CCGACCTGTT CGCGACGATG CGCTACGGCG CGGCGATGGG GATGATGAAC CTGTGCTTCT ACATGGCGCT GCGCACCATC CCGCTCGGCC TCGCCATCGC GATCGAGTTC AGCGGGCCGC TCGCCGTGTC GCTGCTCCAT GCGCGCCGCC CCGCCCATTT CGCGATGGTC GGGCTGGCGG TCGCGGGGCT CGCCCTGCTG CTGCCGATCG GCCCCGGCGA TCATGGCCTC GATCCCGTCG GGATCATGTT CGCGCTGGGG GCCGGGCTGT GCTGGGCGCT CTACATCCTG TTCGGCAAGC GGCTCGGCCA TCTTCCGGGC GGCCAGTCGG TGTCGATCGG CATGGCCACG GCGGCGCTGA TCGTCGTGCC GATCGGCATC CACCAGGGCG GGCTCGCGCT GCTCGATCCG CGGCTGATGG CGCTCGGCCT CGGCGCGGCG ATCCTGTCGA GCGCGATCCC CTATTCGCTT GAGATGGTCG CGCTCAAGCG GCTGTCGCAC AACAGCTTCG GCATCTTCCT CAGCCTCGAG CCCGCCGCCG GCGCGCTGGC CGGCGTCGCG CTGCTCGGCG AGCATCTGAC CGCGCTCCAA TGGCTCGCGG TGCTGCTCGT CGTCATGGCC TCGGCCGGGA CGATGCTGTC GGCGGAGCCG TCCGAGGCAC CGCCGTCCGC CGGGTCCTGA
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Protein sequence | MSSSLSTRPR FDVQLAAAYA ALIGSITAFC VGTSFAKRLF PLVGAEATSA YRVGFAALIL LTVWRPWRGR ITRADLFATM RYGAAMGMMN LCFYMALRTI PLGLAIAIEF SGPLAVSLLH ARRPAHFAMV GLAVAGLALL LPIGPGDHGL DPVGIMFALG AGLCWALYIL FGKRLGHLPG GQSVSIGMAT AALIVVPIGI HQGGLALLDP RLMALGLGAA ILSSAIPYSL EMVALKRLSH NSFGIFLSLE PAAGALAGVA LLGEHLTALQ WLAVLLVVMA SAGTMLSAEP SEAPPSAGS
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