Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0065 |
Symbol | |
ID | 5196944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 62610 |
End bp | 65048 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640579604 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001260576 |
Protein GI | 148552994 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATC TGCTCGGCGA CTTCGTCGCG GAGACACGCG AGACCCTCGA CGCCCTGTCG GGCGAGATCG TCGCGTGGGA ACTCGCGCCC GACGATCGCT CGCGGCTCGA TGCGATCTTC CGCTTCGTCC ATACCGTGAA GGGAAGCTGC GGTTTCCTCG ATCTGCCGCG CCTCGAGAAG CTCAGCCACG CGGCGGAGGA CGTGCTCGCC GACGTCCGCG CCGACCGTCG CCGCCCCGAT CCCGCGCTGG TCAGCGCCGT GCTGGCGGTG ATCGACCGCA TCGCCGAACT GGCCGACGCG ATCGAGAGCG GCCGGACCGT CCCCGACGAG GACGATGCCC GCCTGATCGC GGCGCTTCGG CCCGTGTCCG AGGCCGTCGT CGATACCGCC GATGCCGACG ACGTCGCGCT CGCCGAGGCG CTGGAGGCGA TCCGGATCGC CGAGGAGATG GACGAGGAGG AGGCGGTCGT CCCGGTGCTG GTCGAAGCGC CGGCCGCCGC GGCGCCGGCC GGCCCGCGCG CCGTCTCGCG CAGCATCCGC CTGCCGGTCG ACCTGCTCGA CCGGATGATG GCGGGCGTGT CCGACATGGT GCTGGCGCGC AACGAGCTGG CGCGCCGCCT GCGCGAGAGC GGCGCCGAAT CGAACACCGA GGTCGCCTTC GAGCGGCTGT CGCATTGCAT CGCCGAGATG CGCGACGCGA TCACCCGCAC CCGCATGGCG CGGGTCGAGC ATCTCTTCAC CGCGCTGCCG CGCATGGTCC GCGACATCTC CGCCGAGCTG GGCAAGCTGG TCCAGCTCGA GATCGACGGC GGCGACGTCG AGCTCGATCG CGAGATGATC GAGATGATCC GCGATCCGCT GACCCATATC GTCCGCAACG CGATCGACCA TGGCATCGAG CCGCCCGAGG CGCGGGTGCT CGCCGGCAAG CCGGTGGCGG GGCGTCTCCA CGTCAGCGCC CGGCAGGTCG GCAACCAGAT ATTGATCGAG GTGATCGACG ACGGCCGCGG CATCGATGCC GACCAGCTCG TCGACAAGGC GGTCGCCGCC GGCATTCTCG GCCGGGAGCG CGCCGCGACG CTGAGCTGGG AACGCAAGCT CGAGCTGATC TTCGCGCCCG GCCTGTCGAC CGCGCGGGAG GTGACCGCGA TTTCGGGACG CGGCGTCGGC ATGGACGTCG TCCGCGCCAA TGTCGAACGG ATCGGCGGCC TCGTCGACAT CGACAGCCGG CCGGGGCAGG GGCTGCGCCT GACGCTGCGC GTGCCGCTGA CCCTCACCAT CATCCCCGCG CTGACGATCA GCACCGGCGG CCAGCATTTC GCGATTCCCC GATCGGCGAT CGACGAGATC GTCCGCGTCG GCGGCGACGC CGTCCGCATG GGGACGCTGG GCGGCGCCGA TCTCGTCTTC ATCCGCGGCG TCCGCGTGCC GGTGGTGTCG CTCGGCGCGG TGCTCGGCCT CGAACGGGGC GCACAGGCCA ATCTCGTCGT GCTCAAGCTG TCGGGCGGCG CGCGCTATGC GCTCGCGGTC GACGCGGTCC ACGACCATGA GGAGCTGGTG GTCAAGCCCG CCGCGCCGGT GGTGATGGCC TGCGGCATCT ATGGCGGCAC GACCCTGCCG GACAACAGCC GGCCGATGCT GCTGCTCGAC GTCGCGGGCG TCGCCGAGAA GGCGGGCGTC CGCCGCGACG ACCAGGCGGC GGTCGAGCCG GTGGCCGAGG AGGGCGAGGA GGAGCTGCAC GAGAAGGGCG CCGTGCCCGT CCTGCTGTTC CGTGACCTCG ACGGGGTCGA GCGCGGCGTG CCGCTGGCGC TGGTCGAGCG GATCGAGGAC TGCTTCTCCG CCTCGGTCAG CCACAGCGCG GGCCGGATGC GCCTGAACAT CGACGGGCGG CTGGTGCCGC TGGTGTCGTG CGGCGCGCCG ATCATCGAGG CCAAGGTCCG CGTGCTGCGG ATGCGCGACG GGGCCGAGGA GCTGGCCTAT GCGATCGACA GCGTCATCGA CATCGTCCCG GTCGCGATCG AGCTGCAGCG CAGCGCCGTC GCCGGTCCGG TCGCCGGGGT GATGCTGGTC GAGGAGCGGC CGGTCGAGTT CCTCGACGCC TTCTGGCTGT TCGCGCAGGG GCTGGGCAGC GAGCCGGCCG CCGAGCAGCG CCCGGTCTGC CTGCTGTCGG ACGAGGACCC CTGGACGCGC CAGGTGCTCG CGCCGCTGGT CGAAGGCGCC GGCTATCGGA TCATCTATGC GCCGGAGGAG GGGCCAGCCG CCGATCTCGT CATCGTCGCC GACGGTGCCG CGGCCGACGG GCCGGCCGAA GCGGCGGCGG TGCTGCGGCT GCGCCAGCAT GCCGAGGATC GCGGCGCCTC GCCCGACAGC CTGTGGCGCT ACGACCGGGC CGGCCTCACC GCCGAGTTGC GCCGGTATTG GAACAAGCGG AGCGCCTGA
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Protein sequence | MDDLLGDFVA ETRETLDALS GEIVAWELAP DDRSRLDAIF RFVHTVKGSC GFLDLPRLEK LSHAAEDVLA DVRADRRRPD PALVSAVLAV IDRIAELADA IESGRTVPDE DDARLIAALR PVSEAVVDTA DADDVALAEA LEAIRIAEEM DEEEAVVPVL VEAPAAAAPA GPRAVSRSIR LPVDLLDRMM AGVSDMVLAR NELARRLRES GAESNTEVAF ERLSHCIAEM RDAITRTRMA RVEHLFTALP RMVRDISAEL GKLVQLEIDG GDVELDREMI EMIRDPLTHI VRNAIDHGIE PPEARVLAGK PVAGRLHVSA RQVGNQILIE VIDDGRGIDA DQLVDKAVAA GILGRERAAT LSWERKLELI FAPGLSTARE VTAISGRGVG MDVVRANVER IGGLVDIDSR PGQGLRLTLR VPLTLTIIPA LTISTGGQHF AIPRSAIDEI VRVGGDAVRM GTLGGADLVF IRGVRVPVVS LGAVLGLERG AQANLVVLKL SGGARYALAV DAVHDHEELV VKPAAPVVMA CGIYGGTTLP DNSRPMLLLD VAGVAEKAGV RRDDQAAVEP VAEEGEEELH EKGAVPVLLF RDLDGVERGV PLALVERIED CFSASVSHSA GRMRLNIDGR LVPLVSCGAP IIEAKVRVLR MRDGAEELAY AIDSVIDIVP VAIELQRSAV AGPVAGVMLV EERPVEFLDA FWLFAQGLGS EPAAEQRPVC LLSDEDPWTR QVLAPLVEGA GYRIIYAPEE GPAADLVIVA DGAAADGPAE AAAVLRLRQH AEDRGASPDS LWRYDRAGLT AELRRYWNKR SA
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