| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0060 |
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| Symbol | |
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| ID | 5200673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 58880 |
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| End bp | 59785 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579599 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001260571 |
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| Protein GI | 148552989 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0322341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGCG GAAAGAACGT GCCCGCCACG ATCCCCGCGC TGGGCGGGGA GCAGAGCCTC
AACCGCTATC TGGCCGAGAT CCGGAAGTTT CCGCTGCTGA CGGCGGAAGA GGAATATATG
CTCGCCAAGC GCTTCCAGGA GCATGGCGAT CCCGAGGCGG CGACCCGTCT CGTCACCTCG
CACCTGCGTC TCGTCGCGAA GATCGCGATG GGCTATCGCG GCTATGGCCT GCCGGCCAGC
GAGCTCATCT CCGAAGGCAA TATCGGCCTG ATGCAGGGCG TGAAGAAATT CGAGCCCGAC
CGGGGCTTCC GTCTCGCCAC CTATGCGATG TGGTGGATCA AGGCGTCGAT CCAGGAATAT
ATCCTGCGGT CGTGGAGCCT GGTGAAGATG GGCACCACCG CGGCGCAGAA GAAGCTGTTC
TTCAACCTGC GGCGGATGAA GTCGCAGCTC GAAGCGTTCG AGGACGGCGA CCTCAAGCCC
GAGGACCTCA AGAAGATCGC CACCGACCTC GGCGTGTCCG AGGAAGAGGT GACGAGCATG
AACCGCCGCA TGTCGATGGG CGGCGACGCG TCGCTCAACG TTTCGATGAA CGAGGACGGC
GAAGGCGAGT GGCAGGACAT GCTGGTCGAC CAGGGCCCGC TCCAGGACGA GCGGCTGGCC
GAGGTCGAGG AGAAGTCGGT CCGCCACAAC ATGCTCAACG AGGCGCTGGC CGCGCTCAAC
GATCGCGAGA AGCATATCCT GGTCGAGCGG CGCCTGGTCG ACGAGCCCAA GACGCTCGAG
GAGCTGAGCC AGGTCTATGG CGTCAGCCGC GAGCGAGTCC GCCAGATCGA GGTTCGCGCC
TTCGACAAGC TGCAGAAGGC GATGATGCGG ATCGCCGGCG AGAAGCGCCT GCTGCCGGCG
ATGTGA
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| Protein sequence | MASGKNVPAT IPALGGEQSL NRYLAEIRKF PLLTAEEEYM LAKRFQEHGD PEAATRLVTS
HLRLVAKIAM GYRGYGLPAS ELISEGNIGL MQGVKKFEPD RGFRLATYAM WWIKASIQEY
ILRSWSLVKM GTTAAQKKLF FNLRRMKSQL EAFEDGDLKP EDLKKIATDL GVSEEEVTSM
NRRMSMGGDA SLNVSMNEDG EGEWQDMLVD QGPLQDERLA EVEEKSVRHN MLNEALAALN
DREKHILVER RLVDEPKTLE ELSQVYGVSR ERVRQIEVRA FDKLQKAMMR IAGEKRLLPA
M
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