Gene Swit_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0045 
Symbol 
ID5200504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp46707 
End bp46979 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content61% 
IMG OID640579582 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001260556 
Protein GI148552974 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000165888 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC AGGAGCTTAT CGGCACCGTC GCCGAGGCCA CCGGCATGAC CAAGAATGAT 
GCTTCGAAGG CGGTCGAAGC TGTGTTCGAT TCGATTACCA CCCAGCTCAA GAAGGGCGAC
GAGGTCCGCC TCGTCGGTTT CGGCACTTTC TCGGTGACGA AGCGCAAGGC CTCCACCGGC
CGCAACCCGC GCACCGGCGA ACCCATGAAG ATCAGCGCAT CGAGCCAGCC CAAGTTCAAG
CCGGGCAAGG GCCTGAAGGA CGCCGTCAAC TAG
 
Protein sequence
MNKQELIGTV AEATGMTKND ASKAVEAVFD SITTQLKKGD EVRLVGFGTF SVTKRKASTG 
RNPRTGEPMK ISASSQPKFK PGKGLKDAVN