Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0035 |
Symbol | |
ID | 5200512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 33408 |
End bp | 34622 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640579572 |
Product | hypothetical protein |
Protein accession | YP_001260546 |
Protein GI | 148552964 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCTTCG CCGACCGTCT TTTCCGCCCC CTCCCGCTGT CGATCCTGTG CGTCGCACTG TTCGCGGCGG CCCTGGCCTT CGCGCAGCTC GAACGCGCCG ACGAACGCGG CGTGCCGCCG ATCGACGGGT CGGGCAGCTT CGAAGTCGAC GGAATCAAGG TCGATATGGC CGCGCGCAAT GCCGATCAGG CGCGCACCGC CGGCTGGCGC GAGGCGCAGC GCAAGGGCTG GAAGATGCTG TGGGCGCGGG CCAACGGCAA GCCGGTCGAG AATGCGCCGG GCCTGCCCGA CTCGACGCTC GACTCGATCA GCGGCGGCAT CGTCGTCGAA GAGGAGCATA TCGGCCCCAA CCGCTACATC GCGACGCTGG GCGTGCTGTT CGATCGTGCC CGCGCCGGCG AGCTGCTGGG CGTCAAGGGC GCGATCCGGC GGTCGGCGCC GATGCTCGTC ATCCCGGTCG AATGGAGCGG CGCGACGCCG ATCAGCTTCG AGCGGCGCAG CGAATGGCAG AAGGCCTGGG CCCGCTTCCG CGCCGGCAAC AGCCCGATCG ACTATGTCCG CGTGTCGGGC ACCGGCGCCG ATCCGGTGCT GCTCAACGCC GCCCAGACGC GCCGGCCCGG CCGGGGCTGG TGGCGGATGC TGCTCGACCA ATATGGCGCG GCCGACATCG TCGTGCCCGA GGTCACCCTG TTCCGGCAAT GGCCGGGCGG CCCCGTGATC GGCAGGTTCG TCGCCCGCCA CGGCCCCGAC GCGGCGGTGA TCGACAGCTT CACCCTGACC GCCGAGAATG GCGACGCGCT GCCCGCGATG CTCGATCGCG GCATCGAGCG GATCGACCGC GCCTATACTC GCGCGTTGCA GGAAGGTGCG CTGCGCGCCG ACAAGTCGCT GGTGGTCGAG ACGCCGGCGG CCGAGGTGCC GATCGACGAC GTGCTCGCGG AGATGGCGTC GGCGGCGACC AGCAACATCA CCATCCAGGT CGACACCCCC GATGCGGGGG CGCTGCGCGG ATCGGAGACG GCGCTGCGCG GGATGACGGG GGTGACGGGC GTCCAGACCT CCAGCCTCGC GCTCGGCGGC ATCTCGATCT TCCGGGTGAG CTTCTCGGGC CCGGCGGCCG CCTTCCGCGA GGCGCTGGTC GCGCGCGGCT GGCAGGTCGA GGACGTCGGC GGCGGCTACC GCATCCGCCG TGGCGGGAGC CCGCCCGCCC CATGA
|
Protein sequence | MTFADRLFRP LPLSILCVAL FAAALAFAQL ERADERGVPP IDGSGSFEVD GIKVDMAARN ADQARTAGWR EAQRKGWKML WARANGKPVE NAPGLPDSTL DSISGGIVVE EEHIGPNRYI ATLGVLFDRA RAGELLGVKG AIRRSAPMLV IPVEWSGATP ISFERRSEWQ KAWARFRAGN SPIDYVRVSG TGADPVLLNA AQTRRPGRGW WRMLLDQYGA ADIVVPEVTL FRQWPGGPVI GRFVARHGPD AAVIDSFTLT AENGDALPAM LDRGIERIDR AYTRALQEGA LRADKSLVVE TPAAEVPIDD VLAEMASAAT SNITIQVDTP DAGALRGSET ALRGMTGVTG VQTSSLALGG ISIFRVSFSG PAAAFREALV ARGWQVEDVG GGYRIRRGGS PPAP
|
| |