| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0019 |
|---|
| Symbol | |
|---|
| ID | 5200436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 18302 |
|---|
| End bp | 19330 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640579556 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001260530 |
|---|
| Protein GI | 148552948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG CGATCGCGAC CGACGCCTGG GCGCCGCAGG TCAACGGCGT CGTCCGCACC
CTCCAGGCGG TGACCGCCGA GCTCGGCGCG ATGGGGCACG AGGTCTGCGT GATCGCACCC
GACCAGTTCC TGACCGTCCC CTGTCCCAGC TATCCCGAGA TACGGCTGGC GCTGACCACC
CAGGCCGGGG TCGGCCGCCG CATCGCCGAG TTCGGCGCGG AGGCGATCCA CATCGCCACC
GAAGGGCCGA TCGGCCTTGC CGCGCGGCGC CACTGCCTCG GCCGTCGGCT GGCCTTCACC
ACCGCCTATC ACACCCAGTT CCCCGACTAT GTCGCCGAGC GCACCGGCAT GCCGGCCGAC
TGGTTCTGGC ACTATATCCG CTGGTTCCAC GCGCCGTCGG CGGCGGTGCT GGCCTCGACG
CCGTCGGTCG AGGCGATCCT CGATCAGCGC GGCGTCGGCC CGGTGCAGCG CTGGGGCAGG
GGAGTCGACC TGGCGCTGTT CCGCCCCGAC CGCGCGCCGC ATCCCGCCTT CGCGGCGCTG
CCGCGCCCGA TCCAGCTCTA TGTCGGCCGG GTCGCGGTGG AGAAGAATAT CGAGGCGTTC
CTCGCCTGCG ACACGCCGGG CACCAAGGTG GTCGTCGGCG ACGGCCCGGC CCGCGCCGCC
CTGTCGCGCG ACTATCCGGA GGTCCGCTTC CTCGGCGCGC TGCACGGCGA GGAACTGGCC
TCCGCCTATG CCGGGGCGGA CGTCTTCGTC TTCCCGAGCC GCACCGACAC CTTCGGGCTG
GTGATGATCG AGGCGCTCGC CTGCGGCGCG CCGGTCGCCG CCTATCCGGT GACCGGGCCG
ATCGACATTC TCGCCCCGTC GAGCGCGGCG ATGGACGACG ACCTGGCGAC GGCGATCGGC
CGCGCGCTCC GATGCGATCG CGGCGCGGCG GCAGCCTATG GCGCCACCTT CGGCTGGCGT
CGGAGCGCCG AGCAGTTCCT CGGCGCGCTC GTTCCCCAGG GCGAGGGCCG GCGGCGGCTG
GCCGCCTGA
|
|---|
| Protein sequence | MRIAIATDAW APQVNGVVRT LQAVTAELGA MGHEVCVIAP DQFLTVPCPS YPEIRLALTT
QAGVGRRIAE FGAEAIHIAT EGPIGLAARR HCLGRRLAFT TAYHTQFPDY VAERTGMPAD
WFWHYIRWFH APSAAVLAST PSVEAILDQR GVGPVQRWGR GVDLALFRPD RAPHPAFAAL
PRPIQLYVGR VAVEKNIEAF LACDTPGTKV VVGDGPARAA LSRDYPEVRF LGALHGEELA
SAYAGADVFV FPSRTDTFGL VMIEALACGA PVAAYPVTGP IDILAPSSAA MDDDLATAIG
RALRCDRGAA AAYGATFGWR RSAEQFLGAL VPQGEGRRRL AA
|
|---|
| |