Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0016 |
Symbol | |
ID | 5200620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 16023 |
End bp | 16577 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579553 |
Product | redoxin domain-containing protein |
Protein accession | YP_001260527 |
Protein GI | 148552945 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.276317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAC GTACGGTTCC CAACGTGACC CTGAAGACCC GCGTGCGCGA CGAGAGCGTG GGCGGCCCCA ATCCCTTCCG CTGGCAGGAC GTCCACACCG GCGAGCTGTT CGCGGGCCGC CGCGTCGTCG TGTTCGCGCT GCCGGGCGCC TTCACCCCGA CCTGTTCGAC CGAGCAGTGC CCGGCCTATG AGCGCAGCTA TGACGAGCTC CGCGCGCGGG GCGCCGACGA GGTCTATTGC CTGTCGGTCA ACGACGCCTT CGTCATGTAC CAGTGGGCGA AGCAGCTCGG CGTCGAGAAG ACCAGGATGC TCCCCGACGG ATCGGGCGAC TTCACCCGCC GCATGGGCAT GCTGATCAAC AAGGACCATC TCGGCTTCGG CGACCGTTCG TGGCGCTATG CGATGGTGGT CGACGACGGC CGGATCACCG GCTGGTTCGA GGAGCCCGGC ATCAACGATG TCGGCGCCGA CGACGACCCC TATGGCGAAA GCGCCCCCGA CAAGGTGCTG GCCTGGCTGC ACGAAAACCC GGTGCGCGAG CCGGCCGAGG CTTGA
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Protein sequence | MIGRTVPNVT LKTRVRDESV GGPNPFRWQD VHTGELFAGR RVVVFALPGA FTPTCSTEQC PAYERSYDEL RARGADEVYC LSVNDAFVMY QWAKQLGVEK TRMLPDGSGD FTRRMGMLIN KDHLGFGDRS WRYAMVVDDG RITGWFEEPG INDVGADDDP YGESAPDKVL AWLHENPVRE PAEA
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