Gene Swit_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0016 
Symbol 
ID5200620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp16023 
End bp16577 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID640579553 
Productredoxin domain-containing protein 
Protein accessionYP_001260527 
Protein GI148552945 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.276317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC GTACGGTTCC CAACGTGACC CTGAAGACCC GCGTGCGCGA CGAGAGCGTG 
GGCGGCCCCA ATCCCTTCCG CTGGCAGGAC GTCCACACCG GCGAGCTGTT CGCGGGCCGC
CGCGTCGTCG TGTTCGCGCT GCCGGGCGCC TTCACCCCGA CCTGTTCGAC CGAGCAGTGC
CCGGCCTATG AGCGCAGCTA TGACGAGCTC CGCGCGCGGG GCGCCGACGA GGTCTATTGC
CTGTCGGTCA ACGACGCCTT CGTCATGTAC CAGTGGGCGA AGCAGCTCGG CGTCGAGAAG
ACCAGGATGC TCCCCGACGG ATCGGGCGAC TTCACCCGCC GCATGGGCAT GCTGATCAAC
AAGGACCATC TCGGCTTCGG CGACCGTTCG TGGCGCTATG CGATGGTGGT CGACGACGGC
CGGATCACCG GCTGGTTCGA GGAGCCCGGC ATCAACGATG TCGGCGCCGA CGACGACCCC
TATGGCGAAA GCGCCCCCGA CAAGGTGCTG GCCTGGCTGC ACGAAAACCC GGTGCGCGAG
CCGGCCGAGG CTTGA
 
Protein sequence
MIGRTVPNVT LKTRVRDESV GGPNPFRWQD VHTGELFAGR RVVVFALPGA FTPTCSTEQC 
PAYERSYDEL RARGADEVYC LSVNDAFVMY QWAKQLGVEK TRMLPDGSGD FTRRMGMLIN
KDHLGFGDRS WRYAMVVDDG RITGWFEEPG INDVGADDDP YGESAPDKVL AWLHENPVRE
PAEA