| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0012 |
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| Symbol | |
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| ID | 5200784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 11706 |
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| End bp | 13289 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579549 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001260523 |
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| Protein GI | 148552941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGG ACGGCGGGAT CGATGTGCGG CGCGACCGGC TGGTCATCTT CGCGTCGACG
CTGGGCACCG CGTTCGAATG GTATGACTTC TTCGTCTACG GAACGCTCGC CACGATCGTC
GCCGGCCATT TCTTCCCGTC CGACAATCCG GCCGTCAGCT TCCTGATCTT CCTCGGCAGC
TTCGGCGTCG GCTTCGGCAT GCGGCCCCTC GGCGCGATCC TGTTCGGAGT GCTCGGCGAC
CGGCTGGGCC GCAAATACAC CTTCCTCGTC ACCATCACGC TGATGGGCGT GGCCACCGCC
GCGGTCGGAC TGCTGCCGAC CTATGCGACG ATCGGCGTCG CGGCGCCGAT CCTGCTCGTC
TTCTGCCGCA TCCTCCAGGG GCTGGCGCTC GGCGGCGAAT ATGGCGGGGC GGCGGTCTAT
GTCGCCGAAC ATGCGCCGCG CAACCGGCGC GGCTTCTATA CCAGCTTCAT CCAGTCGGGG
GTCAGCGCCG GCTTCATGCT CAGCCTGTCG GTGGTGCTGC TGTCGAACCA GTTCGTCGAC
AAGGAGGCGT TCGCCGCCTG GGGCTGGCGC ATTCCCTTCC TCTTCTCGCT GGTGCTGCTC
GGCATCTCGC TCTGGGTGCG GCTCAAGCTC AGCGAAAGCC CGGTCTTCAC GGCGATGAAG
GAGAAGGGCG AGGTCGCCCG CAACCCGTTG CGCGAAAGCT TCGACAGCTG GGCCAAGGTC
CGCCGCATCC TGCTCGCGCT GTTCGGCCTG TCGGCGGGGC TGACGGTGAT CTGGTATGTC
GGCCAGTTCC AGTCGCTCTA TTTCCTCCAG AACAGTCTGC GGGTCGACGA CATGGTCGCG
CGCGTGCTGG TCGGCGCGGC GGCGTTCGGG GCGGTGTTCG GCTTCATCCT GTTCGGCTGG
CTGTCGGACC GGATCGGCCG CCGCCGGCTG ATCCTGACCG GCTATGTGCT GACGCTGGTC
TTCCTCTTCC CGCTGTTCCA CTGGATCGCG GCCGCCGCCA ATCCCGGCCT CGCCGCCGCG
ATGGAGCGCG CGCCGGTGGT CGTGACGGGC AGCGACTGCC GCTACGATCC CTTCGCCTCG
CGGCAGGAGA CCGCCTGCGG CAAGGTCCTC GACGCGCTGT CGAAGAAGGG CGTCGCCTAC
ACCAAGGTCG ACGGCGTCCC CGGCACGCCG CCCGCCGTCA CGATCGGCGG CGCGCCGGTC
GATGCGAGCG ACGCCGAGAG CCTCGAGGCC GGGCTCGCCG CCGCCGGCTA CGACCTCGCC
AAGGTCACCC CCTCGCTCGG CGATTCGGCG AAGATCTTCG TCTATCTGCT GATCCTCGGC
TTCTTCTCGG GGATGACCTA CGGGCCGTCG GCGGCGGTGA TGGTGGAGCT GTTCCCGGCG
CGGGTGCGCT ACACCTCGCT GTCGGTGCCC TATCATATCG GCACCGGCTA TTTCGGCGGC
TTCCTGCCCT TCATCAGCCA ATATATCGTC GCCCGCACCG GCGATCCCTT CGCCGGTTTC
TGGTACACGT TCATCGTCGC GGGCGTAGCG TTCCTGATCG CGCTGGTCTG GTTGCCCGAG
ACGGCGGGAA AGGAACTGGA ATAG
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| Protein sequence | MAADGGIDVR RDRLVIFAST LGTAFEWYDF FVYGTLATIV AGHFFPSDNP AVSFLIFLGS
FGVGFGMRPL GAILFGVLGD RLGRKYTFLV TITLMGVATA AVGLLPTYAT IGVAAPILLV
FCRILQGLAL GGEYGGAAVY VAEHAPRNRR GFYTSFIQSG VSAGFMLSLS VVLLSNQFVD
KEAFAAWGWR IPFLFSLVLL GISLWVRLKL SESPVFTAMK EKGEVARNPL RESFDSWAKV
RRILLALFGL SAGLTVIWYV GQFQSLYFLQ NSLRVDDMVA RVLVGAAAFG AVFGFILFGW
LSDRIGRRRL ILTGYVLTLV FLFPLFHWIA AAANPGLAAA MERAPVVVTG SDCRYDPFAS
RQETACGKVL DALSKKGVAY TKVDGVPGTP PAVTIGGAPV DASDAESLEA GLAAAGYDLA
KVTPSLGDSA KIFVYLLILG FFSGMTYGPS AAVMVELFPA RVRYTSLSVP YHIGTGYFGG
FLPFISQYIV ARTGDPFAGF WYTFIVAGVA FLIALVWLPE TAGKELE
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