| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0008 |
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| Symbol | |
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| ID | 5200780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 7946 |
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| End bp | 8509 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579545 |
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| Product | shikimate kinase |
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| Protein accession | YP_001260519 |
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| Protein GI | 148552937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.780526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTATAG CCCTCGACGA CATGCCGCAA AGCCTGCCTC CCAATCTTCC CCATTTTGAC
CGTCCGCTGG TCCTGATCGG GCTGATGGGC GCGGGCAAGT CGACGATCGG CAAGCGGCTC
GCGGCGCGCG TCCACCTCCC CTTCGTCGAC GCCGACCAGG AGATCGAACG CGCGGCGGGG
CTGACCATCT CCGAGATTTT CGCGCGATTC GGCGAGAAGG AATTCCGCGA CGGCGAGCGC
CGGGTGATCG CCCGGCTGAT CGACGGCCGG CCGAAGGTGA TCGCCACCGG CGGCGGCGCC
TTCATGCAGG AGGAGACCCG CGCGCTGATC CTCGACCGCG CCACCGCGGT CTGGCTCGAC
GCCGACATCG AGGTGCTGGC CGACCGGGTC GGCCGGCGCG AGGGCACCCG CCCGCTGCTC
AAGGACCGCG ACGCGCGCGA GGTGCTGGCC GAACTGGCGG CGGTCCGCAA TCCGGTCTAT
GCGCTCGCCC CCATCCACAT CCGCAGCCAG CCGCTGCCGC ACGACGCGAC GGTCGATGCG
ATCCTCAAGG CACTGACGCA ATGA
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| Protein sequence | MCIALDDMPQ SLPPNLPHFD RPLVLIGLMG AGKSTIGKRL AARVHLPFVD ADQEIERAAG
LTISEIFARF GEKEFRDGER RVIARLIDGR PKVIATGGGA FMQEETRALI LDRATAVWLD
ADIEVLADRV GRREGTRPLL KDRDAREVLA ELAAVRNPVY ALAPIHIRSQ PLPHDATVDA
ILKALTQ
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