| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0003 |
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| Symbol | |
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| ID | 5200443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2304 |
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| End bp | 4091 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579540 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001260514 |
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| Protein GI | 148552932 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.808331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGACG CGGCGGACGC CTTATTGCTG CGCGACGGGG TGCTGCTGCT CGGCGCGGCG
ATCGTCTGCG TCCTGATCTT CCGTCGGCTC GGCCTCGGCG CCACGCTCGG CTATCTCGTC
GCGGGGGCGC TGATCGGCCC GCAGGGGTTC GGCCTGATCG GCGACGCCGA ATCGAAGCTC
GGCATCGCCG AGCTCGGCAT CGTCCTGCTG CTGTTCCTCG TCGGCCTCGA ACTCCATCCC
AACCGGTTGT GGCGGCTGCG GCGCGACATC TTCGGACTGG GCTTCGTGCA GGTGGTGGCC
TGCGGCGTCG CGCTCAGCGC GGTGATCTAT TTCGGCACCG CCTTCACCGC CGCCGCGGCG
ATCGCGCTCG GCCTGCCGCT CGCCTTGTCC TCGACCGCGC AGGTGCTGCC GATGCTGCGG
TCGGCGGGAC GCCTCAACAC GCCCGCCGGC GAGCGCGCCT TCTCGGTGCT GCTGTTCCAG
GACCTGTCGC TGATCCCGCT GATCACGATC ATCGCCACCC TGTCGCGTAC CCCGCCCGCC
GCCGATGCGC CGCCCGGCTG GCTGCTCGGC GTCCATACGG TGGTCGCGGT GGTCGGGCTG
GTGCTGGCCG GCCGCTTCAT CATCAACCCG TTGTTCCGCC TGGTCGGGCG GCTGGGCGAG
CGCGAGCTGT TCGTCGCGGC GGGGCTGTTC ACCGTGCTCG CCAGCGCCGC GGTGATGGAG
GCGCTCCATC TGTCGACCGC GCTCGGCGCC TTCGTCGCGG GCGTGATGCT GGCGGATTCG
CCCTACCGGC ACGAGCTGGA GGCCGATGTC GAGCCGTTCC GCACCATATT GCTCGGCCTG
TTCTTCATCG CGGTCGGCAT GTTGCTCGAC CTGCACGTCA TCGCCGAACG GCCGTTGTTC
GTCGCCGCCA TGGCGCTGGC CGTGGTCGCG ACCAAGACGC TCGTGATGTT CGGCGTCGCC
AAGCTGTTCG GCGTGTCGAA TCGCGGGGCG CTGGGCTTTG GCCTGCTGCT CAGCCAGGGC
GGCGAGTTCG CCTTCGTGCT GTTCGCGCAG GCGAGCGAGG CGTTGCTGAT CCGGCCCGAG
GCGGCCAGCC TGTTCGGGGC GATCGTCACC CTGTCGATGG CGACGACTCC CTTCCTGATG
ATGGTCTCCA GCCGTTTCCT CACCCCGCCC CCGAGCCAGG AGGAGCGCCC CGGCCCCGAT
GGGGGCATGA GCCCGGCGGC GATCGTCGTC GGCTATGGCC GCTTCGGCCA GACCGTCGCG
CAGATGCTGA TGGCGGCGGG CACGCGGGTC AGCCTGATCG ACAACGAGAT CGAGCAGATC
GATGTCGCCG AGAAATTCGG ATCGAAGGTC TTCTACGGTG ACGGCACCCG GGTCGAGCTG
CTCCGCCATG CCGGCGCCGA TCAGGCCTGC GCGATCATCT TCTGCGTCGA CGGCGACGGG
CTCGGCAAGG CGCAGTTGCA GCCGGTGCTC AACGCCTTTC CCAATGCGGC GGTGCTGGTC
CGCGCCTTCG ATCGCCGGCA CATGATGGTG CTGGGTCGGC TCGACATCGC GGGCGCGGTG
CGCGAGCTGT TCGAATCGGC GGTGGTGCTG GGCCGGGAGG CGCTCGAAGC GGTCGGCGTC
AGCGAGGCGA ATATCGACAA GATCGAGGCC GAATATCGCC GCCGCGACGG CTTGCGGCTG
GAGGCGCAGA TCGCCGCGGA CGACCTGACC GTGCGCCGCG ACATGATGTT CAACCCGGAT
CGCAAGCTCG ATCTCGAACC GGAAGAGGAT GAGGATGGCG CGGGCTAG
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| Protein sequence | MSDAADALLL RDGVLLLGAA IVCVLIFRRL GLGATLGYLV AGALIGPQGF GLIGDAESKL
GIAELGIVLL LFLVGLELHP NRLWRLRRDI FGLGFVQVVA CGVALSAVIY FGTAFTAAAA
IALGLPLALS STAQVLPMLR SAGRLNTPAG ERAFSVLLFQ DLSLIPLITI IATLSRTPPA
ADAPPGWLLG VHTVVAVVGL VLAGRFIINP LFRLVGRLGE RELFVAAGLF TVLASAAVME
ALHLSTALGA FVAGVMLADS PYRHELEADV EPFRTILLGL FFIAVGMLLD LHVIAERPLF
VAAMALAVVA TKTLVMFGVA KLFGVSNRGA LGFGLLLSQG GEFAFVLFAQ ASEALLIRPE
AASLFGAIVT LSMATTPFLM MVSSRFLTPP PSQEERPGPD GGMSPAAIVV GYGRFGQTVA
QMLMAAGTRV SLIDNEIEQI DVAEKFGSKV FYGDGTRVEL LRHAGADQAC AIIFCVDGDG
LGKAQLQPVL NAFPNAAVLV RAFDRRHMMV LGRLDIAGAV RELFESAVVL GREALEAVGV
SEANIDKIEA EYRRRDGLRL EAQIAADDLT VRRDMMFNPD RKLDLEPEED EDGAG
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