Gene Swit_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5070 
Symbol 
ID5195892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp185248 
End bp186111 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID640579502 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260450 
Protein GI148551020 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG CCCATAACGT CGATGCCCAG CGCCTGAGCT TCATCCTCAA CGAGTTGAGG 
CTTCCTGCCA TCAAGGTGAT CTGGCCCGAG TTTACCGAAC GTGCCGACAA GGAGGGCTGG
CCCGCCACCC GACTGCTCGC TGCACTTACC GAGCATGAAA TGGCCGAACG TGACCGGCGT
AGGATCGAAC GTCATCTGAG CGACGCACGA TTACCACCGG GCAAAACGCT CGACAGCTTC
GCCTTCGACG CCGTGCCGAT GGTCTCGCGG GCGCAGGTCA CGGCCATGAC CTCGGGCGAC
GGATGGCTGG AAAAGGGCGC CAATCTCATC CTGTTCGGCC CGCCGGGCGG AGGAAAGAGC
CACTTGGCGG CAGCCATCGG CCTGCAACTT GTCCAGAATG GTTGGCGCGT GCTGTTCACC
CGCACGTCCG AGCTGGTCCA GAAGCTTCAG CTCGCGCGCC GCGAACTGGC GCTCGAATCC
GCCATCGCCA AGCTCGACAA ATACCACCTG CTCATCCTGG ACGACCTCGC CTATGTCGCC
AAGGATCAGG CTGAAACCTC CGTGCTCTTC GAGTTGATCA GCGCACGCTA TGAGCGCCGA
TCCATGCTCA TCACGGCCAA CCAGCCCTTC GGCGAATGGA ACCGGGTCTT CCCGGATCCC
GCCATGACGC TCGCGGCCGT CGACCGTCTC GTTCATCACG CCACCATCTT CGAGATGAAT
GTCGAGAGCT ATCGTCGCAG GGCCGCCCTC CAGCGACAGA CAGGGGCTGG AAGGACCCCA
AAATACGCGA CAATCAAATC CATCGAGAAA ATGTCGATCA GCGACAATCA GAGCGAAGAA
TCGCCCTTGC CAGCGACAAT CTAA
 
Protein sequence
MTKAHNVDAQ RLSFILNELR LPAIKVIWPE FTERADKEGW PATRLLAALT EHEMAERDRR 
RIERHLSDAR LPPGKTLDSF AFDAVPMVSR AQVTAMTSGD GWLEKGANLI LFGPPGGGKS
HLAAAIGLQL VQNGWRVLFT RTSELVQKLQ LARRELALES AIAKLDKYHL LILDDLAYVA
KDQAETSVLF ELISARYERR SMLITANQPF GEWNRVFPDP AMTLAAVDRL VHHATIFEMN
VESYRRRAAL QRQTGAGRTP KYATIKSIEK MSISDNQSEE SPLPATI