Gene Swit_5042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5042 
Symbol 
ID5196007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp154191 
End bp154760 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content64% 
IMG OID640579474 
Producthypothetical protein 
Protein accessionYP_001260422 
Protein GI148550992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value0.723187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGATC AGACAATGAC GACTGCGCAG GTCGCGGCCC TGCTGGACAG GTTGCAGGTG 
CTGGAAGCGC GCGCCGATAT CACGGACTGT GTCTACCGTC TCGCGCGCGC GGGCGACCGG
CTGGACCGCG CGCTCATGCA ATCCGCTTTC GCGCCCGGCG CGACGGTGGA TTATGGTGCA
TTGTTTCAGG GCAGTGCCGA AGACTTCATC GACTTCACCT TCCAGTTCCA GCGCGTGGAT
ATTCCGGTCC ATCACATGAT CGGCAACGTC ATGGTCACGA TGCATGGCGA TGCGTCCGCG
ATCGCGGAAT CATACGAACT GGCGCGGCAT CCGATGCCGC CGGGAGTGGA CGGGGACATG
ATCCTGGCAT CGCGCCTGCT GGATCAGATG GTGCGGACCG ATGACGGCTG GCGGATCGAG
CGGCGGTTGA AGGTGGCCGA CTGGGCACGG ACGCTGACCG GTGGCGACGG GCTGTACGAC
AGGCTGCCAT TGGCCAAGGG TCGCCGCGAC GCGACGGACG CCTCTTATGT TTTCGGACAG
TCGGGGCGGA TCGCAGGACA AGATGCATGA
 
Protein sequence
MADQTMTTAQ VAALLDRLQV LEARADITDC VYRLARAGDR LDRALMQSAF APGATVDYGA 
LFQGSAEDFI DFTFQFQRVD IPVHHMIGNV MVTMHGDASA IAESYELARH PMPPGVDGDM
ILASRLLDQM VRTDDGWRIE RRLKVADWAR TLTGGDGLYD RLPLAKGRRD ATDASYVFGQ
SGRIAGQDA