Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4931 |
Symbol | |
ID | 5196026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 42901 |
End bp | 43527 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579370 |
Product | resolvase domain-containing protein |
Protein accession | YP_001260318 |
Protein GI | 148550888 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.107506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.566204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCG GCTACATGCG CGTATCGACC GGGGAGCAGA ACCTCGACCT CCAGCGCGAT GCCCTGGAAC GGGCTGGATG CGAGCGGATC TATGACGACG TCTGTTCTGG GCGGGCGACC GAGCGTCTCG GCCTGGCCAA GGCGCTCGAC GTCGCCCGAG ATGGCGACGC TCTCGTTGTA TGGAAGCTCG ATCGCATCGG CCGCTCGCTG ACGCATGTCG TCGGCCTGGT CAGCGACCTG CAGAAACGCG GGGTCGGGCT CAAGGTGCTG ACCGGCGACG TGGACACAAC CACGGCGACC GGCAGGCTCG CATTCGGCAT CTTCGCGACG CTCGCCGAGT TTGAGCGTGA CCTCATTCAC GAACGGACCA TGGCGGGGCT GGCGGCGGCC CGCGCGCGAG GTCGCGCCGG CGGGCGTCCG CGTGTGATGA CAAAGCAGAA GCTCAAAGCA GCGATGGCCA TGATGGCCGA CCGCGACAAT GCTGCGCGCG ATGTCGCCGC CCAGCTCGGG ATGTCGTTGT CGACGCTCTA TGCCTACGTT GACGCCAAAG GCCAGCCACG GGAACAGGCG ACGGAACTTC TCGGTAAACC GACGACGAGG GGTTCCGCTC GGGCGCAACA GGCCTGA
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Protein sequence | MLIGYMRVST GEQNLDLQRD ALERAGCERI YDDVCSGRAT ERLGLAKALD VARDGDALVV WKLDRIGRSL THVVGLVSDL QKRGVGLKVL TGDVDTTTAT GRLAFGIFAT LAEFERDLIH ERTMAGLAAA RARGRAGGRP RVMTKQKLKA AMAMMADRDN AARDVAAQLG MSLSTLYAYV DAKGQPREQA TELLGKPTTR GSARAQQA
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