| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4916 |
|---|
| Symbol | |
|---|
| ID | 5195896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | + |
|---|
| Start bp | 27567 |
|---|
| End bp | 27914 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640579356 |
|---|
| Product | IS66 Orf2 family protein |
|---|
| Protein accession | YP_001260304 |
|---|
| Protein GI | 148550874 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 77 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.256223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGC TGCCGCCCTC AACGCGGATA TTCCTGGCCT GCGGCGCAAC AGATATGCGT
AAGGGTTTTG ACGGCCTGGC TGTGATGACG CAGCAAGTTC TGGAGCAGAG CCCGCATTCC
GGTGCGCTGT TCGCCTTTCG AGGGAAGCGC GGTGATCTGG TAAAGCTGCT CTGGTATGAC
GGTCAGGGCA TGTGCCTTTT CTCCAAGCGG ATGGACCGAG GCCGGTTCAT TTGGCCATCG
ACCAAGACCG GTTCGGTGGT GATGACGGCG GCCCAGCTTT CCATGCTTCT GGAAGGCATC
GACTGGCGGC GGCCGGAACG CACTTTCACC CCGTCACTCG CGGGCTAA
|
|---|
| Protein sequence | MIPLPPSTRI FLACGATDMR KGFDGLAVMT QQVLEQSPHS GALFAFRGKR GDLVKLLWYD
GQGMCLFSKR MDRGRFIWPS TKTGSVVMTA AQLSMLLEGI DWRRPERTFT PSLAG
|
|---|
| |