Gene Swit_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5397 
Symbol 
ID5195852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp303802 
End bp305307 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content67% 
IMG OID640579324 
Product2-octaprenylphenol hydroxylase 
Protein accessionYP_001260272 
Protein GI148550833 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.567178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAA GCTTGATGGT AGCGGCCCGG GACCGGGAGC GTCTTGGTGA GGTCACCGGG 
GTCCTGGCGC GCTATGGCCT CGACACGGCG ATCGACCGGC TCGGCCTGGG CGCCAAAGAT
CTTCTTGCGG GCGAGGCAGC GGCGCTGCCC GCACGCACGC GCCTGGCGCT GGAGGAATTG
GGTCCCACCT TCGTCAAGCT CGGACAAATT CTCGCCACGC GCAGCGATCT TCTTCCTCCC
GACTGGATCA CCGAATTGGA GCGGCTTCAC AGCCAGGCGG CGACGCTCCC GTTCGAAATG
GTGCGGCCCG CCATCGAGGA GGCTTTGGGA GAACCTGTCG GCAAGGCGTT CGCCGCGTTC
GATCCCGAGC CGCTGGCCGC CGCTTCGATG GCGCAGGTCC ACCGCGCCCA CCTGCACGAT
GGTCGCGCCA TCGTCCTCAA GGTCCGGCGG CCCGGCATCC GTCCCCGCAT GGAAGCGGAT
CTGCGCCTCA TCGCCCAGTT CGCGGCGGTA CTCGAGCGGG CCAGTGCGGA AATCCGGCGC
TTTGCGCCCA CCGCGCTCGT CCAACAGCTC GCTTCCGCAA TCCTGGAAGA ACTCGACTTC
ACCAACGAGG CCCGCAATGC CGACCGCTTG CGCGCCGACC TCGTCGGCAA CGCGCAGGTC
GTCATTCCCG GGATCCACTG GGAATGGACG TCGGAAACGC TCCTCGCCAT GGATTATGTC
GAAGGGGTCG CGCCGCGCTC GGCAGAGGCC CTCGTCCAGG CGGACATCGA TCCCCACGCG
ATCGCATCGC TCGGCGCCCA GGTCGTGCTC GACATGGTCC TTCTCACCGG GCGGTTCCAT
GCCGATCCCC ACCCCGGCAA TCTCCTGTGC TTGCCCGGAA ACCGCCTCGC CTTGCTGGAT
CTAGGCCTCA TCGGCCATGT CAGCCCCCGG CGCCGGGAAG AGCTTTTGCG CTTCGTCCAG
GCCATCAATA TCGGGGATCC GCAGGCCCTG GCGGAGACGC TCACCCTGTG GTCCGCCGGT
GAGAGCCCGC CTCGCGAGCG GCTCCTTCTG GCGGCCGAAC AGCTTGTCGC CCGCCATGGC
GGCACGCGCC TGGTGCTCGC CACCCTGGTC AACGATTTTT TCGCGCTCAT GCGGCAGGAG
CGGCTGACCG TCCCGCCCGA CCTGCTCCTC ATCTTCAAGG CACTGGTGAC GCTCGATGGC
GTCCTCGCCA ACATCGCCCC CGGCTTCGAC CTGACCCTTG CCCTGCGGCA GGCTGCAGTG
CGCATCGTTG CCTCGCGCCT CGATCCTGCT GCCTGGACCC CGGTACTCCA AGGTCTGCTG
CTTGAGATCA CAAGGATCGG GCAGGATGGC CCGCGGCTGC TGAGGCTGAT CATCGAGCGG
CTGGAGCGCG ATCAATTCAT CCCTCCGCAG CGTGGGGGCA CGGAGATCGC CGCGGCCGGG
CGGTGGATCG CGGGCGCCAT TGTCGCAGGA TCCCTCATCC TCGCGGCCGC TCTGATGCTT
TTCTAA
 
Protein sequence
MLKSLMVAAR DRERLGEVTG VLARYGLDTA IDRLGLGAKD LLAGEAAALP ARTRLALEEL 
GPTFVKLGQI LATRSDLLPP DWITELERLH SQAATLPFEM VRPAIEEALG EPVGKAFAAF
DPEPLAAASM AQVHRAHLHD GRAIVLKVRR PGIRPRMEAD LRLIAQFAAV LERASAEIRR
FAPTALVQQL ASAILEELDF TNEARNADRL RADLVGNAQV VIPGIHWEWT SETLLAMDYV
EGVAPRSAEA LVQADIDPHA IASLGAQVVL DMVLLTGRFH ADPHPGNLLC LPGNRLALLD
LGLIGHVSPR RREELLRFVQ AINIGDPQAL AETLTLWSAG ESPPRERLLL AAEQLVARHG
GTRLVLATLV NDFFALMRQE RLTVPPDLLL IFKALVTLDG VLANIAPGFD LTLALRQAAV
RIVASRLDPA AWTPVLQGLL LEITRIGQDG PRLLRLIIER LERDQFIPPQ RGGTEIAAAG
RWIAGAIVAG SLILAAALML F