| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5383 |
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| Symbol | |
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| ID | 5195700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 289017 |
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| End bp | 291833 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579310 |
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| Product | TraG domain-containing protein |
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| Protein accession | YP_001260258 |
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| Protein GI | 148550819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00832018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.693135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAGG TCTTCACGGT CGGTGGCGGC GAATATCTGG TCAACACCTT CAATGCTGTA
GCGGCCTGGT CAGGGGGCGG GGGCTATCGC GCGCTGCTCC GGGTCGTAAT GGTCATGGGC
CTCATCTACT CGCTTCTCGT TGTGGCCTTC ACGCTCAACT ACAAAGCGTG GATGAACTGG
TTCCTCCAGG CCACGGCGAT CTATCTGTGC CTTATGGTGC CGACCGTCGA CATCAAGGTG
ACAGACCGGG TAAATCCGTC GCTCGCGCCG GCAACGATAG ACAATGTGCC GTTAGGGCTA
GGCGTGCTGG CCAGCTTCAC CACGCAGATC GGCGACTGGA TGACACGCAC CGCCGAGACC
GTGTTCGTGA TGCCCGGCGA GCTTAATTAC ACGACAAATG GCATGGTTTA TGGCGCGCGT
CTGTTCGACG CGACGCGCAA CTTCGTGATC CGCGACGCCG AGTTTGCGAC CAATCTCGAG
AAGCATTTCA AGAACTGTGT GTTCGGCGAC GTCATGCTCA ACCAGAAATC GCTGACCGAG
CTGTCGAAGG CGCAGGATCT GTGGGCTGCG ATCGGCCCGG GTTCGGAAGC GCGCTCCCAG
GAATGGTTGG AAAAGGACGG CAGCGGCGCG GTCACGAGCT ATATCGTGAC GTGCCGCCAG
GCCTATGACG GTCTTTCGGG TCAGTGGGCC AACATGATCG AGGCCAATAC CCCGATCTGG
GCGAAAGAGG TCTACCCCAA GCTCAGCAAC GCGCTTGCTG CCGACAAGCT GAAGCATGAT
GTTCCCATCG TGAACCAGGC GTTCACGGGG TCGGGAAGCA GCTACGCTGA CTATATGCGG
CAGAACACCG CGATCAACGC ATTCATGCAG GCGCGCAACT CCATGGCGGG TGGCACGGGG
GCGGCGGCAA TCGACACGTT CGCGCAGACC CGTGCCGACG TACAGGCGCG CAACACCTAT
AATTCGATTG CGCAACAGGC GATGGCCTGG GTGCCTATCC TCAACATCGT TCTGACAGTC
GTATTCTTTG CGATGTTCCC GGTCATCTTC CCGCTCTTCC TCATGCCGCA AACCGGGCTG
AGCGCGCTGA AGGGCTACGC TGTCGGCTTC TTCTACCTGG CTGCCTGGGG CCCGCTTTAC
GTGATCCTGC ACATGATCTG CATGACGCGC GCCGAGACCG CGGCGACCGG CATCGCATCG
GGCGGCGTTA CGCTCGGCAC TTTCGCAGGC ATCGGCGCCG TGAACGGTGA GACTGCGACG
ATCGCAGGGT TCATGCTGAT GTCGGTCCCG TTCCTCGCGG CCGGACTGGC ACGCGGCGCG
ATGTCTATCG CCGGCCAGTC CATGTCCATG CTCGCGCCCG CACAGAACGC CGCCGAAGCC
GCTGCCCTCG AACAGACGAC GGGCAACTAT TCCTATGGGA ATGTCAGCTG GGCAAATTCG
ACGTCCAACA TGCAGCAGAG CGACCAGTGG ACCAAGGCGC CGAGCTATAT GGGCGGCGCG
CCGATGACAA GTTGGCGCCA GGACAATGGC GCGCTGATCA ATGGCTTCGG CAACGGGCAG
GAGGTCTTCG ATACGGGCGG CGCCATTTCA CGCCTGGCGT TTACGCCAAC GATGTCGTCG
GGCGCCGTCG CCGAATGGCG CGAAATGGCG AACGAGGCGC ACCGTCAGTC GCAGGCCTAT
GAAAACGCCG CAAACGACAT TCTGACCTCG ACCCATACCA ATCGCAGCGC ATTCGGAACC
TCGACCGAGC GGTCGTCGGG ATGGGATTCG AGCAGCGGCC GCCAGGCCAA CACTTCGATC
GAACAGTTCG ACCGGAGAAC AGGAAGCAGT TCTCAGGGGC TGGAAGACCG ATCCTCGACG
AGCCATTCCG AACGGGTTTC AGATAGTCAT GATCGAAGTG CAGTTACTGC AGACGTCGTA
ACCGGCAGAC TCTCGGCAGG ACTGGGAGGT CCGCAAGCGG GAGGTTCGGG CACGAAGGGC
GGCAATGGTG GCAGGTTTGG ACGCCTCCCA GGGATCTCAG GAGACGTATC TAAGTCTGGA
ACGCAGCAAG AGCAGCTGCA AAGAAGCACA GGACAGACCA ATTCCACCGA TAGCTCCAAC
ACCGCTTCCA GCGGGATACG CGACGAGCAT TCGAACGGCA CCGGCGCGAG CTCCTCGGAC
GGTACCTACA GTCGGAGTGG CGTGTTCAGT CGCGCCTCGC AGACTTCGTC GGCTTCGGTG
AGCACTGAAG ACGCTCTCTC CCGCGCGCGC TCATATCAGG AGTCCGCGCG CAAGCTGGAG
GAACTGTCCC AGCAGCTGTC TCGCGACGCC AGTTGGGCCG AGAGCCATGG CATGCAACTC
AGCACGAACC TCAGCCAGGA CCTCGCGAAC TGGTACCGTG CGCAACAGGC GGCAAATCCT
GGTCTGGATG CTCCCGAAAT CTGGGCGACG GACCTTTCCG AGCATCAGCG CAGTGTCCGG
GATGAGATGG TCCAGCGATG GATGTCGGAA AAGCGGGAGG CGATCTACGA GGAAATCCGC
GGAAGCCTGA ACGAGCCGGA TCTCGTCGAT GTGCACCGCA CCAGCGTATC GTCCGCAGCC
GATGTCAGGG CGACCTATCA TCCGCATGGT GCTGGCGGCA TTCCGGCCGG GCCTAGTGCA
GGCGATCCCG GCGCAGCAGC TGCTGTGATT TCGTCAGGCA AAGCTGCGCT AGACGGGGAT
CGAGCAGCCG CACAAGCGGG TAGAGCTTCC AATATGCAGG GCGCCTCCCG CATTCAGTCG
GAGGTGAATG AGGGCCACAA TAAGGGTTTC TTCCTGGATC CCGAGCTTCG GAAATGA
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| Protein sequence | MLEVFTVGGG EYLVNTFNAV AAWSGGGGYR ALLRVVMVMG LIYSLLVVAF TLNYKAWMNW
FLQATAIYLC LMVPTVDIKV TDRVNPSLAP ATIDNVPLGL GVLASFTTQI GDWMTRTAET
VFVMPGELNY TTNGMVYGAR LFDATRNFVI RDAEFATNLE KHFKNCVFGD VMLNQKSLTE
LSKAQDLWAA IGPGSEARSQ EWLEKDGSGA VTSYIVTCRQ AYDGLSGQWA NMIEANTPIW
AKEVYPKLSN ALAADKLKHD VPIVNQAFTG SGSSYADYMR QNTAINAFMQ ARNSMAGGTG
AAAIDTFAQT RADVQARNTY NSIAQQAMAW VPILNIVLTV VFFAMFPVIF PLFLMPQTGL
SALKGYAVGF FYLAAWGPLY VILHMICMTR AETAATGIAS GGVTLGTFAG IGAVNGETAT
IAGFMLMSVP FLAAGLARGA MSIAGQSMSM LAPAQNAAEA AALEQTTGNY SYGNVSWANS
TSNMQQSDQW TKAPSYMGGA PMTSWRQDNG ALINGFGNGQ EVFDTGGAIS RLAFTPTMSS
GAVAEWREMA NEAHRQSQAY ENAANDILTS THTNRSAFGT STERSSGWDS SSGRQANTSI
EQFDRRTGSS SQGLEDRSST SHSERVSDSH DRSAVTADVV TGRLSAGLGG PQAGGSGTKG
GNGGRFGRLP GISGDVSKSG TQQEQLQRST GQTNSTDSSN TASSGIRDEH SNGTGASSSD
GTYSRSGVFS RASQTSSASV STEDALSRAR SYQESARKLE ELSQQLSRDA SWAESHGMQL
STNLSQDLAN WYRAQQAANP GLDAPEIWAT DLSEHQRSVR DEMVQRWMSE KREAIYEEIR
GSLNEPDLVD VHRTSVSSAA DVRATYHPHG AGGIPAGPSA GDPGAAAAVI SSGKAALDGD
RAAAQAGRAS NMQGASRIQS EVNEGHNKGF FLDPELRK
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