| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5304 |
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| Symbol | |
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| ID | 5195771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 202186 |
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| End bp | 203334 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579231 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001260179 |
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| Protein GI | 148550740 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCCGC GTGGATATCA TTTCGGCCAG TTCGTCCTCG ATCCCGAGGA TCGGCGCCTG
CTGCGTGACG GCGTTCCGGT CGAGCTCAAC GCGCGCTATC TCGACGCGCT GGCGCTTCTC
GTGCGCAATG CCGGGTCGCT CGTCGGCAAG GACCGTTTTC TAAGTGAAGT CTGGAAAGAT
GTGCCTGTCA CCGACGAGGC GCTGACCCAG TGCATCCGGC TCCTTCGCCA GCGTCTGGGT
GACGATGCGA GCCGTCCGCA TTTCATCGAA ACGGTACCCA AGCATGGCTA CCGCTTCATT
GCCGAGGTCG ACTGGCGCGA AAGCTCTGCC CCGGCCGAAG ACGCGGCCCC CCACACGCTT
CCCCCGTCGG CCGCGCCCTC GGCGCTCCGC CGCGTAGCGA TGATGGCGGG AGCCGGGACC
CTGGGTGCTG GGGGCGCCGG ATTGATCGGC GGGCTCGCAT ACGGCTTTAT CGCCGCGACG
CCGCCGCTCC CGAGCGGAGG CGGCGCCGCG TCCTCCGTCT TCGTGTTGCT CTGGCTCACC
CTGGCGGTGG CGCTCGTGGG CGGCGCGGGC GTCAGCCTGG GGATTGCCAT AGCCGAGGCC
GCAGGCAAAC GCCCATGGCT CACTCCTGGC GGCGCAGTCG GCGGAATGAT CGTCGGCGCC
GTCGTGAAGT TGCTCGGGAT CGACGCGTTC AATCTCCTGT TCGGCCAGTC ACCGACAGGG
ATTACGGGCG GGCTCGAAGG GCTTTTCCTG GGGGCCGGCG TGGGCCTTGG CGCGACCCTG
TCCGGCATGG GCGGCTCGGA TCGTTCCCTT CGCTCTGTGG CAGCGCGGGC GGCGCTTTGC
GGCGGTGCGG CCGGGAGCGT TGTCGTTCTT CTTGGCGGCC ACCTGCTGGC GGGGAGCTTC
GAGCAACTCG TCCAGACATT CCCGCAATCG CGGATCGGCC TTGCGCAGAT CGGCGGCCTG
TTCGGCGAGC AGGGTCTTGG ACCGGTGGCC GAGGCGGCCT GCGCGTTCGG CGAAGGGGCG
CTGTTCGCGG CGGGCGTGGT CGTTGCCATG ACGCTCGCGC GCCGTGAGAT GGACAGGCCT
GAAGGCCGCT CGGCGGCGTC GTCCGGCCTG GTTGCGAGTC GCAGAGGCGG CGCGCCTCGG
TTGGGCTAG
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| Protein sequence | MPPRGYHFGQ FVLDPEDRRL LRDGVPVELN ARYLDALALL VRNAGSLVGK DRFLSEVWKD
VPVTDEALTQ CIRLLRQRLG DDASRPHFIE TVPKHGYRFI AEVDWRESSA PAEDAAPHTL
PPSAAPSALR RVAMMAGAGT LGAGGAGLIG GLAYGFIAAT PPLPSGGGAA SSVFVLLWLT
LAVALVGGAG VSLGIAIAEA AGKRPWLTPG GAVGGMIVGA VVKLLGIDAF NLLFGQSPTG
ITGGLEGLFL GAGVGLGATL SGMGGSDRSL RSVAARAALC GGAAGSVVVL LGGHLLAGSF
EQLVQTFPQS RIGLAQIGGL FGEQGLGPVA EAACAFGEGA LFAAGVVVAM TLARREMDRP
EGRSAASSGL VASRRGGAPR LG
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