| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5283 |
|---|
| Symbol | |
|---|
| ID | 5195698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | + |
|---|
| Start bp | 183159 |
|---|
| End bp | 183968 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640579210 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_001260158 |
|---|
| Protein GI | 148550719 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.974803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCG CCACCTATAA TGTGAACGGC GTCAATGGCC GGCTGCCGGT GCTGCTGCGC
TGGCTTGAGG AAGCGCAGCC TGATGTGGTT GTGCTCCAGG AATTGAAGGC GCCGCAGGAG
AAGTTTCCGG AAAGTGCGAT CCGCGATCTT GGCTATGATG TCATCTGGCA CGGACAGAAG
TCGTGGAACG GCGTTGCGCT GCTCAGCCGC GTCGGCGAAA TCCACGAGAC GCGGCGGGGG
CTTCCGGGCG ATCCCGACCC GGGCCAGAGC CGCTATATCG AGGCGGCGGT CAACGGCATC
CTGATCGGCG GGCTTTACCT GCCAAACGGT AATCCGCGGC CTGGCCCCAA GTTCGACTAC
AAGCTGCGCT GGTTCGACCG GCTGATCGAG CATGCGGCGG GGTTACTGGA GAGCGGACTG
CCGGTGATGC TGGCGGGCGA CTTCAATGTC ATGCCGACCG ATCTCGACGT CTACAAGCCG
GAGCGCTGGC TCGACGACGC GCTATTCGCA CCCGAAGTAA GGGCGGCCTA TTTCCGGCTG
CTGGATCAGG GCTGGACCGA CGCGCTGCGC ACGTTGCACC CGGGCGAGGT CATCTACACC
TTCTGGGACT ATTTCCGGAA CGCCTATGGC CGCAATGCCG GCCTGCGCAT CGATCACCTG
CTGCTCAGCC CCGCGCTTGC CGACCGGCTG CTCGATGCCC AGGTCGACCG CCATGTCCGG
GGCTGGGAAA AGACCAGCGA CCATGCCCCG GTCTGGATCG AACTGGCCGA CAAGCCAAAG
CGCAAGCGAG CCCCCAAGGC GAAAATATGA
|
|---|
| Protein sequence | MKIATYNVNG VNGRLPVLLR WLEEAQPDVV VLQELKAPQE KFPESAIRDL GYDVIWHGQK
SWNGVALLSR VGEIHETRRG LPGDPDPGQS RYIEAAVNGI LIGGLYLPNG NPRPGPKFDY
KLRWFDRLIE HAAGLLESGL PVMLAGDFNV MPTDLDVYKP ERWLDDALFA PEVRAAYFRL
LDQGWTDALR TLHPGEVIYT FWDYFRNAYG RNAGLRIDHL LLSPALADRL LDAQVDRHVR
GWEKTSDHAP VWIELADKPK RKRAPKAKI
|
|---|
| |