| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5274 |
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| Symbol | |
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| ID | 5195864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 169911 |
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| End bp | 171416 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640579201 |
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| Product | protease Do |
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| Protein accession | YP_001260149 |
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| Protein GI | 148550710 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAAATC CTGACAGGAT CTTTGCCTCC CTATTAAGCA CCGCCGCCGC CGTGGGTCTT
GTCATCGGCC AGCCATCCCC CGCTGCCGCG CAATCGCCGC CCGCCGCATC GCCAGTCGTG
CCACGCCCAG GCGCGCCGCA AAGCTTTGCC GATCTCACCG AAAGGCTGGC GCCCGCCGTC
GTCAACATCT CGACCCGCCA GCGCGTGCAG ATGCCGAGCT TCAGCCCCTT TGCCGGCACG
CCCTTCGAGC GCTTCTTCGG AAGTCCCACG GGACCGCGCA CCCGCGAGGC GCAGTCGCTC
GGCTCAGGCT TCATCCTGTC CGCCGACGGC TACATTGTCA CCAACAACCA CGTCATCACC
GCCGACGGGC AGGGCAAGGT CGAGACGATC ACGGTCACCT TGCACAATGG CGAGGAATAT
CCGGCGACCC TCGTCGGTAG CGATCCCGCC TCGGACCTGG CGGTCCTCAA GATTACGTTG
CGCAAACCGC TGCCCTTCGT GACCTTCGGC GATTCCACGC GAGTCAGGGT TGGCGACTGG
GTGCTCGCGA TCGGCAATCC TTTCGGCCTG GGCGGCACGG TCACAGCCGG TATCGTCTCG
GCGGTCTACC GCAATACCGG TACAGGGCGC GCCTATGACC GCTATCTGCA AACCGACGCC
TCGATCAACC GCGGCAATTC GGGCGGACCG ATGTTCGACA GCAGCGGGCG GGTCATCGGC
ATCAACAATG CGATCTTCTC GCCCACGGGC GGAAATGTCG GGATCGGCTT TGCCATCCCC
GCGGAGATCG CCGCGCCGAT CGTCGAGAAG CTCAAGGCCG GCAAGGCCAT CGAACGCGGT
TATCTGGGCG TGACGATCCA GCCGATGACC GAAGACCTCG CGTCATCGCT CGGCGTTCCG
CGAGACCGCG GCGAGTTCGT CCAGAGCGTG GAGCCCGGCG GGCCCGCGGC ACAGGCTGGC
ATCCGCGCCG GCGACGTCAT CCTGCGGGTC GACGGCAAGG AGGTGACTCC AAGCCAAAGC
CTGTCGTTCC TCGTTGCGAG CGTCGAACCT GGCCGCAAGG TCGCAGTCGA ACTCATGCGC
GGCAACCAGC GCATGACCGT GACTGCCACG CCGGTGCTTC GTCCCAGCGA GGACAAGCTC
GCCCGGCAGG GTTTTGGCCG CGATGACCGT CGTTTCGACA ATTTCGACAA GGATCGCGCG
TCCCCCAGCG AAAAGACACT CGGGCTTGCC GTCGAACCGC TGACTCCAGG CATCGCGCGT
CAACTCGGTG CGAGCGACGT CTCCCAGGGT CTCGTCATCA GCAGCGTCGA GGGCAATTCC
GATGCGGCGC GCAAAGGCCT CAGCCGCGGC GACATCATCC TGTCGGCCAA CAACCGGCCG
GTGGCGAGCG CTGCTGATCT CGAGGCCGCG ATCCGGCAGG CCAGGACGGC GGGACGATCG
GCTATCCTGC TACGGGTCAA GGGGCGCGGC GAAGCGCCGG CCTATGTGCC GGTACGGCTG
CGATAG
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| Protein sequence | MRNPDRIFAS LLSTAAAVGL VIGQPSPAAA QSPPAASPVV PRPGAPQSFA DLTERLAPAV
VNISTRQRVQ MPSFSPFAGT PFERFFGSPT GPRTREAQSL GSGFILSADG YIVTNNHVIT
ADGQGKVETI TVTLHNGEEY PATLVGSDPA SDLAVLKITL RKPLPFVTFG DSTRVRVGDW
VLAIGNPFGL GGTVTAGIVS AVYRNTGTGR AYDRYLQTDA SINRGNSGGP MFDSSGRVIG
INNAIFSPTG GNVGIGFAIP AEIAAPIVEK LKAGKAIERG YLGVTIQPMT EDLASSLGVP
RDRGEFVQSV EPGGPAAQAG IRAGDVILRV DGKEVTPSQS LSFLVASVEP GRKVAVELMR
GNQRMTVTAT PVLRPSEDKL ARQGFGRDDR RFDNFDKDRA SPSEKTLGLA VEPLTPGIAR
QLGASDVSQG LVISSVEGNS DAARKGLSRG DIILSANNRP VASAADLEAA IRQARTAGRS
AILLRVKGRG EAPAYVPVRL R
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