Gene Swit_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5210 
Symbol 
ID5195746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp99231 
End bp99884 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID640579139 
Producthypothetical protein 
Protein accessionYP_001260087 
Protein GI148550648 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.63102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.225819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTC GCGTATTTGC TGAGCGACAT GGCCTTGCGG TTGAGCGCCA CCGCGAGATC 
GGCGAGCGAC ACACCGGTGT TGAAGGCGAC GTCGAGCGCG CGCGTTTCAT CGTCGCTGAA
AGGCCGAATG TAGCCGTGGA CAAGGCCGAG GCTATTCGCG CGCGAGGTGA GCGCAGCTTT
GGTCCGTCCC AGGCTTGCCG CCAGGACCTT GGTCGGGACA CGGCCATAGT CCGCACGAAG
GCGCGCCTCG TCGGCCTCGG TCCAGTCCGG ACCAAGCCGC CAGCCATTGC GGTTGGCATG
AAGCCCGCGC AGGCCCAGAT ATTCGGCGCG GTGGCGCAGC GATCCAGCGG TGCGGCCAAG
CTGGCGGCGC AGCGGGGTGA GACTCGTACC GTCGATGTAG GCCTTGCGCA GCAGGGCGTC
TTCTTCCGGC GTCCAGGCCC TGCCCCAGCC GCGGCCATAG CCCAGCTTGC GGATGGCGAG
GCCGAAGCCG CGGACCGTGC GTTGGGGAAA GCCTTCCTGG CCGAGCATCC CGACGATCGC
CGTGTAGCGA TGACCCGCTT CGGCCAGGTC GAGAGCCCTC GCCGTTTCCG CCTCCGACCA
GTCCGGCGGA TGGTTCGCAT GCACGATGCC GAGAGCTCCG GCCCGGCTGG ATAG
 
Protein sequence
MVGRVFAERH GLAVERHREI GERHTGVEGD VERARFIVAE RPNVAVDKAE AIRARGERSF 
GPSQACRQDL GRDTAIVRTK ARLVGLGPVR TKPPAIAVGM KPAQAQIFGA VAQRSSGAAK
LAAQRGETRT VDVGLAQQGV FFRRPGPAPA AAIAQLADGE AEAADRALGK AFLAEHPDDR
RVAMTRFGQV ESPRRFRLRP VRRMVRMHDA ESSGPAG