Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5210 |
Symbol | |
ID | 5195746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 99231 |
End bp | 99884 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579139 |
Product | hypothetical protein |
Protein accession | YP_001260087 |
Protein GI | 148550648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.63102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.225819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGTC GCGTATTTGC TGAGCGACAT GGCCTTGCGG TTGAGCGCCA CCGCGAGATC GGCGAGCGAC ACACCGGTGT TGAAGGCGAC GTCGAGCGCG CGCGTTTCAT CGTCGCTGAA AGGCCGAATG TAGCCGTGGA CAAGGCCGAG GCTATTCGCG CGCGAGGTGA GCGCAGCTTT GGTCCGTCCC AGGCTTGCCG CCAGGACCTT GGTCGGGACA CGGCCATAGT CCGCACGAAG GCGCGCCTCG TCGGCCTCGG TCCAGTCCGG ACCAAGCCGC CAGCCATTGC GGTTGGCATG AAGCCCGCGC AGGCCCAGAT ATTCGGCGCG GTGGCGCAGC GATCCAGCGG TGCGGCCAAG CTGGCGGCGC AGCGGGGTGA GACTCGTACC GTCGATGTAG GCCTTGCGCA GCAGGGCGTC TTCTTCCGGC GTCCAGGCCC TGCCCCAGCC GCGGCCATAG CCCAGCTTGC GGATGGCGAG GCCGAAGCCG CGGACCGTGC GTTGGGGAAA GCCTTCCTGG CCGAGCATCC CGACGATCGC CGTGTAGCGA TGACCCGCTT CGGCCAGGTC GAGAGCCCTC GCCGTTTCCG CCTCCGACCA GTCCGGCGGA TGGTTCGCAT GCACGATGCC GAGAGCTCCG GCCCGGCTGG ATAG
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Protein sequence | MVGRVFAERH GLAVERHREI GERHTGVEGD VERARFIVAE RPNVAVDKAE AIRARGERSF GPSQACRQDL GRDTAIVRTK ARLVGLGPVR TKPPAIAVGM KPAQAQIFGA VAQRSSGAAK LAAQRGETRT VDVGLAQQGV FFRRPGPAPA AAIAQLADGE AEAADRALGK AFLAEHPDDR RVAMTRFGQV ESPRRFRLRP VRRMVRMHDA ESSGPAG
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