Gene Swit_5209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5209 
Symbol 
ID5195597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp98261 
End bp99064 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID640579138 
Producthypothetical protein 
Protein accessionYP_001260086 
Protein GI148550647 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.767147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.342725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGC AGGATCGACA CATCAGGAAC GTCCTGAAAC TCTTCGATGC GCATTGCTAT 
CGTCACGACC GCTACACGCT CTTCTCCGAC TGCATGGAGC TCATAGCGAT CAGCATCTCG
AACAGCGTCG ACAGCCGATC CCGGGAAACG CGCGAGGCGC GCTATCTCGA GATCGTGGGA
CGATATGAGC AGCACACCAT CGAGATGTTC CCTCGCGTCT TCGGAGAGAT CACAATGGCA
CTGGAGGAAG CGCCAGGGGA CGTCCTCGGG AGCATCTTCA CCGCGCTCGA GATCCACAAC
AAGAACCGTG GGCAATTCTT CACGCCCTAT CCGGTTTGCC AGATGATGGC ACAGGTCACG
CTTGGCGATG CCAAGGACGC CCTGGCGCTG ATCGACGACA AGGGTTTCGT CAGCGCGATG
GAACCCGCCT GCGGTGCCGG CGCCATGGTC ATTGCTCTCG CCGAAGCGAT GCGCGCCGCC
GGGATCAACT ATCAGCGCCA TCTCCACGTG ACGGCGATCG ATATCGACCA ACGCGCCGTA
CACATGGGCT ATATCCAGTT CTCGCTGCTC CACATTCCGG CCCACGTGAT CGTTGGTAAC
TCTCTCAGCA ACGAGGTCCG CGAACACTGG TTCACGCCGG CCCACATCCT CGGCGGCTGG
GGCGCCAGGC TTGCCAGCCA GGAACGCTTG GTCGAACAAC CCCCGCGATT TTTTACTGAA
ACGACACCGG AACGCACAAC CCACGATAAG CAAGCCCAAG AGCCAAGGAC CAGAACGGTC
GGCGAGCAGT TGACCCTATT CTGA
 
Protein sequence
MPPQDRHIRN VLKLFDAHCY RHDRYTLFSD CMELIAISIS NSVDSRSRET REARYLEIVG 
RYEQHTIEMF PRVFGEITMA LEEAPGDVLG SIFTALEIHN KNRGQFFTPY PVCQMMAQVT
LGDAKDALAL IDDKGFVSAM EPACGAGAMV IALAEAMRAA GINYQRHLHV TAIDIDQRAV
HMGYIQFSLL HIPAHVIVGN SLSNEVREHW FTPAHILGGW GARLASQERL VEQPPRFFTE
TTPERTTHDK QAQEPRTRTV GEQLTLF